HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:40.6 nTPM
HPA:40.6 nTPM
GTEx:32.2 nTPM
FANTOM5:22.6 Scaled Tags Per Million
Pig:22.3 nTPM
Mouse:17.3 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057888
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.6
Sample id Sample description nTPM
Hippocampus
nTPM: 39.8
1898 Male, age 80, left hemisphere 41.3
1911 Female, age 85, right hemisphere 40.5
2529 Female, age 94, left hemisphere 40.1
2148 Female, age 91, left hemisphere 39.8
2621 Female, age 67, right hemisphere 38.8
1855 Male, age 76, left hemisphere 38.4
Dentate gyrus
nTPM: 39.6
1927 Female, age 91, both hemispheres 40.7
2528 Male, age 74, both hemispheres 40.7
2246 Female, age 85, both hemispheres 39.7
2010 Male, age 76, both hemispheres 39.6
2530 Female, age 94, left hemisphere 38.6
2531 Female, age 67, both hemispheres 38.5
Entorhinal gyrus
nTPM: 39.3
1787 Male, age 76, left hemisphere 40.3
1938 Female, age 85, left hemisphere 39.6
2117 Female, age 91, right hemisphere 39.3
2686 Male, age 75, right hemisphere 39.1
2613 Female, age 94, left hemisphere 39.0
2764 Male, age 80, right hemisphere 38.7
Hippocampus, CA1
nTPM: 40.3
2749 Male, age 80, left hemisphere 43.4
1873 Female, age 85, both hemispheres 39.7
2082 Female, age 91, right hemisphere 39.6
2527 Male, age 74, both hemispheres 39.5
2045 Male, age 76, both hemispheres 39.2
Hippocampus, CA2
nTPM: 40.5
1963 Male, age 80, left hemisphere 41.1
1940 Female, age 85, left hemisphere 40.9
2249 Male, age 74, both hemispheres 40.8
1892 Male, age 76, both hemispheres 40.6
2437 Female, age 94, left hemisphere 39.8
2113 Female, age 91, right hemisphere 39.7
Hippocampus, CA3
nTPM: 40.6
2137 Male, age 80, left hemisphere 43.3
1867 Male, age 76, both hemispheres 41.0
2620 Female, age 94, left hemisphere 40.6
2436 Male, age 74, both hemispheres 40.0
1891 Female, age 85, both hemispheres 39.2
2861 Female, age 67, both hemispheres 39.2
Parahippocampal cortex
nTPM: 38.8
2245 Female, age 91, both hemispheres 39.7
2018 Male, age 76, both hemispheres 39.6
2250 Female, age 67, right hemisphere 39.4
1990 Female, age 91, right hemisphere 39.2
1850 Male, age 80, both hemispheres 39.0
1933 Female, age 85, both hemispheres 39.0
2692 Male, age 74, both hemispheres 38.7
2693 Female, age 94, both hemispheres 38.1
2622 Female, age 67, right hemisphere 37.7
2532 Female, age 72, left hemisphere 37.6
Perirhinal gyrus
nTPM: 39.5
1847 Female, age 91, left hemisphere 40.5
1794 Male, age 80, right hemisphere 40.2
1841 Female, age 85, right hemisphere 40.0
2848 Male, age 76, right hemisphere 38.4
2521 Female, age 94, right hemisphere 38.3
Subiculum
nTPM: 39.8
1901 Male, age 80, both hemispheres 41.3
2042 Male, age 76, both hemispheres 40.2
2619 Male, age 74, both hemispheres 39.8
1977 Female, age 85, both hemispheres 39.4
2438 Female, age 94, left hemisphere 39.2
2729 Female, age 91, right hemisphere 39.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.2
Samples: 197

Max nTPM: 67.0
Min nTPM: 15.0
Std nTPM: 8.3
Median nTPM: 31.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 67.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 64.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 54.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 54.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 53.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 53.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 53.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 52.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 52.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 52.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 47.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.6
FF:10153-102I9 76 years, female 23.2
FF:10169-103B7 60 years, female 21.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.3
Samples: 4

Max nTPM: 29.5
Min nTPM: 17.0
Sample A Female 29.5
Sample B Female 20.5
Sample C Male 22.2
Sample D Male 17.0
Entorhinal cortex
nTPM: 18.7
Samples: 4

Max nTPM: 24.0
Min nTPM: 13.9
Sample A Female 17.9
Sample B Female 24.0
Sample C Male 19.0
Sample D Male 13.9
Subiculum
nTPM: 18.3
Samples: 4

Max nTPM: 24.5
Min nTPM: 14.3
Sample A Female 24.5
Sample B Female 18.2
Sample C Male 14.3
Sample D Male 16.0
Ventral hippocampus
nTPM: 19.2
Samples: 4

Max nTPM: 25.3
Min nTPM: 14.2
Sample A Female 19.5
Sample B Female 14.2
Sample C Male 25.3
Sample D Male 17.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 20.0
Min nTPM: 11.7
Sample A Male 20.0
Sample B Male 15.8
Sample C Female 17.5
Sample D Female 11.7
Hippocampal formation
nTPM: 17.3
Samples: 4

Max nTPM: 18.8
Min nTPM: 15.1
Sample A Male 18.0
Sample B Male 15.1
Sample C Female 17.1
Sample D Female 18.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
68162257 Antisense, RP_041122_02_F02, Mouse strain C57BL/6J (56 days, male) 0.5

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