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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

Read more
44.621
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:958.0 nTPM
HPA:958.0 nTPM
GTEx:636.1 nTPM
Pig:125.9 nTPM
Mouse:1073.9 nTPM
Allen mouse:9.7 Expression energy

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

Read more
, antibody HPA067442
Hypothalamus mean intensity 44.621
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

Read more
FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 5.533
Periventricular hypothalamic nucleus 20.650
Supraoptic nucleus 17.291
Tuberal nucleus 29.317
Ventral tuberomammillary nucleus -
Lateral preoptic area 6.669
Medial preoptic area 17.289
Suprachiasmatic nucleus 22.328
Paraventricular hypothalamic nucleus 6.791
Anterior hypothalamic area, central 19.484
Ventral medial hypothalamic nucleus 35.331
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 44.621
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 0.803
Dorsal medial hypothalamic nucleus 7.875
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max nTPM 958.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 779.8
2226 Male, age 75, left hemisphere 789.8
1961 Female, age 42, unknown 769.8
Dorsomedial nucleus
nTPM: 888.5
1989 Male, age 62, unknown 1024.2
2017 Female, age 42, unknown 829.7
2041 Female, age 72, unknown 811.5
Lateral hypothalamic area
nTPM: 828.8
1791 Male, age 80, right hemisphere 940.2
2412 Male, age 62, unknown 810.1
2228 Male, age 66, unknown 802.7
2271 Male, age 75, both hemispheres 762.4
Mamillary body
nTPM: 958.0
2413 Male, age 66, unknown 1099.7
1923 Female, age 72, unknown 1082.9
1945 Male, age 80, right hemisphere 908.7
1834 Female, age 42, unknown 875.2
1948 Female, age 72, unknown 823.6
Paraventricular nucleus
nTPM: 768.4
2700 Male, age 62, unknown 768.4
Preoptic area
nTPM: 899.8
1861 Female, age 42, unknown 942.4
1907 Male, age 80, right hemisphere 908.7
2414 Female, age 72, unknown 848.3
Supraoptic nucleus
nTPM: 826.5
1894 Female, age 72, unknown 855.2
2835 Female, age 72, unknown 831.4
2043 Male, age 62, unknown 793.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 636.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 636.1
Samples: 202

Max nTPM: 1938.9
Min nTPM: 44.4
Std nTPM: 250.6
Median nTPM: 615.3
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 1938.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 1706.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 1470.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 1268.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 1237.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 1199.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 1070.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 1061.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 1038.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 1026.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 1025.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 1022.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 1000.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 992.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 977.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 965.7
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 950.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 949.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 942.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 934.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 921.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 921.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 915.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 909.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 886.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 882.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 875.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 874.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 872.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 871.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 863.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 858.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 851.8
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 847.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 843.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 840.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 837.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 832.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 816.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 816.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 810.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 799.7
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 793.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 788.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 786.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 783.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 772.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 768.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 766.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 761.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 761.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 760.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 760.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 754.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 754.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 747.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 743.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 741.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 729.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 727.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 721.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 721.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 712.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 704.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 704.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 702.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 695.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 693.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 689.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 687.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 686.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 685.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 684.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 675.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 673.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 672.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 671.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 669.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 669.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 661.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 660.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 657.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 656.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 654.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 653.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 653.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 652.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 652.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 645.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 640.9
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 639.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 636.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 631.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 630.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 629.1
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 627.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 626.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 625.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 622.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 617.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 615.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 615.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 614.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 605.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 601.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 598.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 597.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 597.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 591.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 585.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 583.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 580.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 580.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 575.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 566.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 566.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 564.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 562.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 556.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 552.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 548.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 545.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 544.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 544.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 544.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 542.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 542.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 540.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 538.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 533.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 531.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 531.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 530.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 526.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 523.4
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 521.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 518.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 510.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 510.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 510.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 508.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 505.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 504.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 503.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 502.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 501.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 493.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 490.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 488.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 484.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 478.2
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 477.1
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 474.1
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 472.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 465.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 465.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 465.1
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 463.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 459.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 456.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 453.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 450.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 444.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 443.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 440.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 436.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 436.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 435.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 432.2
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 431.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 431.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 421.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 418.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 415.1
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 404.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 404.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 396.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 391.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 374.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 371.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 368.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 362.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 362.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 357.2
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 356.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 346.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 328.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 325.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 316.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 306.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 305.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 296.5
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 283.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 282.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 277.0
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 249.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 208.0
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 187.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 187.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 184.6
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 97.8
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 44.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 125.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 126.0
Samples: 4

Max nTPM: 175.0
Min nTPM: 74.6
Sample A Female 175.0
Sample B Female 154.4
Sample C Male 99.8
Sample D Male 74.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1073.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 1073.9
Samples: 4

Max nTPM: 1216.7
Min nTPM: 1009.6
Sample A Male 1009.6
Sample B Male 1216.7
Sample C Female 1046.1
Sample D Female 1023.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 9.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 9.7
275696 Antisense, RP_040617_01_C08, Mouse strain C57BL/6J (56 days, male) 13.6
79556636 Antisense, RP_071204_01_A02, Mouse strain C57BL/6J (56 days, male) 12.5
73512352 Antisense, RP_050719_02_A05, Mouse strain C57BL/6J (56 days, male) 2.9
71022960 Antisense, RP_050719_02_A05, Mouse strain C57BL/6J (56 days, male) 2.7

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