HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:584.3 nTPM
HPA:584.3 nTPM
GTEx:562.0 nTPM
FANTOM5:1759.2 Scaled Tags Per Million
Pig:692.8 nTPM
Mouse:3042.7 nTPM
Allen mouse:20.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003819Antibody CAB024907
Glial cells Not detectedNot detected
Neuronal cells HighHigh



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 584.3
Sample id Sample description nTPM
Hippocampus
nTPM: 567.6
1898 Male, age 80, left hemisphere 658.6
2529 Female, age 94, left hemisphere 580.3
2148 Female, age 91, left hemisphere 563.7
1855 Male, age 76, left hemisphere 550.8
1911 Female, age 85, right hemisphere 528.0
2621 Female, age 67, right hemisphere 524.5
Dentate gyrus
nTPM: 486.6
2528 Male, age 74, both hemispheres 566.5
1927 Female, age 91, both hemispheres 558.0
2010 Male, age 76, both hemispheres 515.5
2246 Female, age 85, both hemispheres 501.3
2530 Female, age 94, left hemisphere 405.0
2531 Female, age 67, both hemispheres 373.2
Entorhinal gyrus
nTPM: 494.4
1938 Female, age 85, left hemisphere 615.0
2117 Female, age 91, right hemisphere 577.1
1787 Male, age 76, left hemisphere 489.5
2764 Male, age 80, right hemisphere 478.0
2613 Female, age 94, left hemisphere 428.9
2686 Male, age 75, right hemisphere 377.8
Hippocampus, CA1
nTPM: 584.3
2749 Male, age 80, left hemisphere 708.8
2527 Male, age 74, both hemispheres 678.9
1873 Female, age 85, both hemispheres 573.4
2082 Female, age 91, right hemisphere 520.7
2045 Male, age 76, both hemispheres 439.8
Hippocampus, CA2
nTPM: 536.6
2249 Male, age 74, both hemispheres 610.2
1892 Male, age 76, both hemispheres 598.2
2113 Female, age 91, right hemisphere 564.5
1963 Male, age 80, left hemisphere 550.6
1940 Female, age 85, left hemisphere 462.7
2437 Female, age 94, left hemisphere 433.2
Hippocampus, CA3
nTPM: 536.0
2137 Male, age 80, left hemisphere 600.7
2436 Male, age 74, both hemispheres 594.0
1867 Male, age 76, both hemispheres 560.7
1891 Female, age 85, both hemispheres 551.2
2620 Female, age 94, left hemisphere 483.0
2861 Female, age 67, both hemispheres 426.1
Parahippocampal cortex
nTPM: 524.7
2250 Female, age 67, right hemisphere 648.5
1933 Female, age 85, both hemispheres 594.3
1850 Male, age 80, both hemispheres 556.8
2692 Male, age 74, both hemispheres 556.5
1990 Female, age 91, right hemisphere 548.5
2245 Female, age 91, both hemispheres 511.8
2622 Female, age 67, right hemisphere 482.8
2018 Male, age 76, both hemispheres 478.7
2693 Female, age 94, both hemispheres 448.4
2532 Female, age 72, left hemisphere 420.4
Perirhinal gyrus
nTPM: 538.9
1847 Female, age 91, left hemisphere 683.2
1841 Female, age 85, right hemisphere 548.8
1794 Male, age 80, right hemisphere 530.4
2521 Female, age 94, right hemisphere 471.8
2848 Male, age 76, right hemisphere 460.3
Subiculum
nTPM: 538.2
2619 Male, age 74, both hemispheres 623.6
2729 Female, age 91, right hemisphere 620.5
1977 Female, age 85, both hemispheres 537.1
1901 Male, age 80, both hemispheres 521.2
2438 Female, age 94, left hemisphere 484.4
2042 Male, age 76, both hemispheres 442.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 562.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 562.0
Samples: 197

Max nTPM: 1312.3
Min nTPM: 102.5
Std nTPM: 254.0
Median nTPM: 527.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 1312.3
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 1221.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 1198.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1129.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 1106.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 1091.3
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 1089.1
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 1079.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1058.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 1039.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 1006.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1759.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1759.2
FF:10153-102I9 76 years, female 2141.4
FF:10169-103B7 60 years, female 1377.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 692.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 625.0
Samples: 4

Max nTPM: 837.7
Min nTPM: 427.0
Sample A Female 837.7
Sample B Female 597.3
Sample C Male 637.8
Sample D Male 427.0
Entorhinal cortex
nTPM: 519.1
Samples: 4

Max nTPM: 590.2
Min nTPM: 407.4
Sample A Female 500.7
Sample B Female 590.2
Sample C Male 578.0
Sample D Male 407.4
Subiculum
nTPM: 673.5
Samples: 4

Max nTPM: 841.7
Min nTPM: 533.0
Sample A Female 841.7
Sample B Female 672.6
Sample C Male 646.6
Sample D Male 533.0
Ventral hippocampus
nTPM: 692.8
Samples: 4

Max nTPM: 821.9
Min nTPM: 551.5
Sample A Female 797.3
Sample B Female 551.5
Sample C Male 821.9
Sample D Male 600.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3042.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2950.0
Samples: 4

Max nTPM: 3159.9
Min nTPM: 2613.2
Sample A Male 2870.2
Sample B Male 2613.2
Sample C Female 3156.8
Sample D Female 3159.9
Hippocampal formation
nTPM: 3042.7
Samples: 4

Max nTPM: 3252.6
Min nTPM: 2932.8
Sample A Male 3252.6
Sample B Male 2942.3
Sample C Female 3043.0
Sample D Female 2932.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.8
1692 Antisense, RP_Baylor_102700, Mouse strain C57BL/6J (56 days, male) 20.8
1691 Antisense, RP_Baylor_102700, Mouse strain C57BL/6J (56 days, male) 14.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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