We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
WFS1
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • WFS1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:71.2 nTPM
HPA:71.2 nTPM
GTEx:110.8 nTPM
FANTOM5:282.7 Scaled Tags Per Million
Pig:327.2 nTPM
Mouse:191.0 nTPM
Allen mouse:9.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA029128
Glial cells Low
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 71.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 48.3
1854 Male, age 80, left hemisphere 63.9
1857 Female, age 85, left hemisphere 62.5
2290 Female, age 72, unknown 50.4
2481 Female, age 94, left hemisphere 48.5
2289 Male, age 61, right hemisphere 45.6
1781 Male, age 74, unknown 44.7
2288 Male, age 75, left hemisphere 41.3
2846 Female, age 79, unknown 29.6
Claustrum
nTPM: 25.0
2196 Female, age 79, unknown 42.8
2198 Male, age 80, both hemispheres 25.9
2491 Male, age 75, both hemispheres 25.7
2284 Female, age 91, both hemispheres 24.8
2568 Male, age 61, both hemispheres 23.6
2645 Female, age 72, unknown 22.3
2392 Female, age 94, both hemispheres 21.2
1956 Male, age 74, unknown 19.8
2292 Female, age 85, both hemispheres 18.7
Globus pallidus, externus
nTPM: 37.1
2646 Male, age 61, right hemisphere 48.7
1996 Male, age 80, right hemisphere 44.6
2772 Female, age 79, unknown 33.7
2567 Female, age 72, unknown 29.3
2395 Male, age 75, both hemispheres 29.1
Globus pallidus, internus
nTPM: 34.7
2483 Female, age 94, right hemisphere 52.7
2037 Male, age 80, right hemisphere 39.6
2287 Male, age 75, right hemisphere 36.8
1818 Male, age 74, unknown 34.3
2566 Female, age 72, unknown 28.5
2778 Female, age 91, both hemispheres 27.2
2111 Female, age 85, right hemisphere 24.1
Nucleus accumbens
nTPM: 71.2
1856 Female, age 91, right hemisphere 92.2
2824 Male, age 61, right hemisphere 89.3
1806 Female, age 85, left hemisphere 85.4
1783 Male, age 74, unknown 85.1
2698 Female, age 72, unknown 72.0
2732 Male, age 80, right hemisphere 70.7
2286 Male, age 75, left hemisphere 45.1
2391 Female, age 94, left hemisphere 29.3
Nucleus basalis of Meynert
nTPM: 43.2
2569 Male, age 61, both hemispheres 57.9
2393 Male, age 80, right hemisphere 43.9
2484 Female, age 94, left hemisphere 41.5
2821 Male, age 75, both hemispheres 29.3
Nucleus of the diagonal band
nTPM: 42.9
1979 Male, age 74, unknown 62.6
1812 Female, age 91, both hemispheres 49.2
2775 Male, age 80, right hemisphere 38.5
2195 Female, age 85, both hemispheres 34.6
2029 Male, age 61, right hemisphere 29.8
Olfactory tubercle
nTPM: 31.0
1846 Male, age 80, right hemisphere 37.3
2856 Male, age 75, right hemisphere 30.5
2487 Female, age 94, left hemisphere 29.3
1998 Female, age 91, both hemispheres 27.0
Putamen
nTPM: 40.8
1838 Male, age 80, right hemisphere 65.1
1937 Female, age 91, right hemisphere 55.8
2482 Female, age 94, left hemisphere 40.7
1829 Male, age 74, unknown 33.8
2647 Male, age 75, left hemisphere 33.5
2489 Female, age 72, unknown 30.5
2466 Female, age 79, unknown 26.5
Septal nuclei
nTPM: 36.0
2059 Female, age 85, both hemispheres 43.6
2009 Female, age 91, both hemispheres 43.5
2199 Male, age 80, right hemisphere 36.4
2031 Female, age 72, unknown 34.1
2394 Male, age 61, left hemisphere 32.8
2629 Female, age 94, right hemisphere 31.3
1960 Male, age 74, unknown 30.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 110.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 59.8
Samples: 246

Max nTPM: 130.4
Min nTPM: 18.0
Std nTPM: 19.7
Median nTPM: 57.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 130.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 107.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 107.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 106.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 104.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 103.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 103.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 102.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 101.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 101.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 97.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 97.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 97.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 96.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 94.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 94.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 93.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 92.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 92.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 91.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 90.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 90.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 89.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 88.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 86.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 85.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 85.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 85.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 84.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 84.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 83.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 83.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 83.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 81.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 81.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 81.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 81.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 80.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 80.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 80.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 80.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 79.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 79.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 78.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 78.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 78.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 77.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 77.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 76.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 76.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 76.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 75.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 75.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 74.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 73.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 72.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 72.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 71.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 71.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 71.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 70.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 70.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 70.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 70.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 69.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 69.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 69.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 69.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 68.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 68.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 68.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 68.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 68.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 67.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 67.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 67.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 66.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 66.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 66.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 66.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 66.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 66.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 66.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 66.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 66.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 66.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 66.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 65.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 64.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 64.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 64.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 64.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 63.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 63.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 63.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 62.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 62.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 62.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 61.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 60.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 60.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 60.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 60.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 60.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 60.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 60.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 60.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 59.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 59.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 59.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 59.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 59.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 59.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 59.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 59.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 58.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 58.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 58.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 58.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 58.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 58.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 57.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 57.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 57.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 57.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 57.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 57.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 57.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 57.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 56.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 56.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 56.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 56.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 56.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 56.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 55.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 55.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 55.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 54.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 54.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 54.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 54.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 54.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 53.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 53.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 53.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 53.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 53.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 53.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 52.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 52.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 52.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 52.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 52.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 52.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 51.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 51.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 51.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 51.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 51.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 50.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 50.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 50.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 50.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 50.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 50.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 50.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 50.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 50.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 49.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 48.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 48.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 48.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 48.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 48.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 48.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 48.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 48.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 48.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 47.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 47.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 46.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 46.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 46.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 46.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 46.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 45.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 45.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 45.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 45.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 44.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 44.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 43.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 43.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 43.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 43.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 43.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 43.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 43.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 43.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 43.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 43.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 43.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 43.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 43.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 42.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 42.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 42.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 42.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 42.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 42.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 42.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 41.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 41.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 40.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 38.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 38.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 38.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 37.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 37.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 36.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 36.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 34.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 33.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 32.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 32.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 32.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 32.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 32.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 30.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 29.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 28.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 28.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 28.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 28.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 27.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 27.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 27.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 26.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 25.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 22.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 22.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 21.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 19.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 18.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 18.0
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 110.8
Samples: 246

Max nTPM: 243.8
Min nTPM: 12.3
Std nTPM: 50.0
Median nTPM: 104.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 243.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 238.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 228.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 226.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 225.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 223.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 216.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 215.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 213.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 213.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 212.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 212.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 210.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 209.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 208.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 203.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 196.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 195.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 191.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 191.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 188.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 187.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 185.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 179.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 178.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 178.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 176.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 175.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 175.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 175.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 170.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 169.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 167.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 166.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 165.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 165.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 163.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 162.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 162.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 161.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 160.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 160.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 159.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 159.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 158.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 158.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 157.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 157.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 156.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 155.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 154.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 153.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 152.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 152.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 151.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 146.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 146.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 145.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 144.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 143.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 143.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 140.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 140.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 138.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 137.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 137.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 137.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 136.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 135.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 135.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 134.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 134.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 134.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 133.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 133.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 132.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 131.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 131.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 131.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 131.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 130.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 130.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 130.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 128.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 126.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 125.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 125.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 124.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 124.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 124.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 123.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 121.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 121.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 121.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 120.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 118.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 118.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 118.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 118.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 118.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 117.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 117.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 117.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 117.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 116.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 116.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 115.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 115.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 115.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 114.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 114.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 113.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 112.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 111.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 111.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 110.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 109.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 109.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 108.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 108.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 107.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 104.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 104.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 104.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 104.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 104.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 103.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 103.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 103.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 103.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 102.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 102.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 102.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 102.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 102.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 102.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 101.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 100.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 100.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 98.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 97.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 96.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 96.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 95.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 95.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 95.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 94.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 94.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 94.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 93.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 93.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 92.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 91.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 91.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 90.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 87.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 87.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 87.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 87.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 87.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 86.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 85.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 85.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 84.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 83.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 83.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 83.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 83.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 83.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 83.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 82.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 82.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 81.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 80.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 78.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 78.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 78.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 78.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 77.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 76.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 76.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 76.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 75.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 74.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 74.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 72.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 72.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 72.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 70.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 70.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 70.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 70.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 70.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 69.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 69.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 68.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 67.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 67.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 65.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 64.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 63.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 63.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 62.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 60.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 60.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 59.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 58.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 56.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 56.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 56.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 54.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 54.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 53.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 52.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 51.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 51.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 51.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 51.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 51.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 51.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 50.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 49.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 48.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 47.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 45.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 44.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 43.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 42.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 42.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 41.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 40.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 38.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 38.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 36.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 33.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 33.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 32.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 30.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 29.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 28.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 27.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 25.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 23.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 21.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 13.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 12.3
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 54.9
Samples: 205

Max nTPM: 127.3
Min nTPM: 15.2
Std nTPM: 20.6
Median nTPM: 53.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 127.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 116.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 115.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 103.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 102.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 100.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 96.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 95.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 94.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 92.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 91.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 91.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 90.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 88.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 86.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 86.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 83.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 82.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 81.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 80.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 80.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 79.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 78.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 78.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 78.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 76.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 76.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 76.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 75.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 75.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 74.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 74.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 73.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 73.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 72.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 72.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 72.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 72.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 71.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 71.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 71.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 71.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 71.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 71.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 70.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 70.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 70.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 70.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 69.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 69.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 69.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 68.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 68.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 67.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 67.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 66.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 66.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 64.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 64.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 64.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 64.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 63.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 63.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 63.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 63.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 62.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 62.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 61.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 61.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 61.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 61.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 61.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 60.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 60.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 60.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 60.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 60.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 60.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 59.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 58.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 58.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 58.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 58.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 57.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 57.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 57.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 56.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 56.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 56.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 56.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 56.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 55.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 55.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 55.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 55.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 55.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 55.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 54.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 54.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 54.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 54.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 53.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 53.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 53.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 53.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 53.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 52.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 52.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 52.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 52.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 52.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 52.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 52.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 51.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 51.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 51.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 51.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 51.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 50.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 50.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 50.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 50.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 50.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 49.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 49.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 49.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 49.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 48.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 48.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 48.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 48.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 48.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 47.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 47.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 47.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 47.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 46.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 46.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 46.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 45.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 45.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 45.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 44.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 44.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 43.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 43.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 42.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 42.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 41.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 41.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 40.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 40.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 40.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 40.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 40.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 40.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 39.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 39.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 37.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 36.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 36.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 36.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 36.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 35.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 35.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 35.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 34.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 34.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 34.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 34.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 33.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 33.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 33.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 33.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 32.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 32.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 32.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 31.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 31.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 30.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 30.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 29.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 29.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 29.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 29.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 28.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 28.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 28.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 27.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 27.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 26.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 25.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 24.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 22.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 22.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 21.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 21.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 20.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 19.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 19.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 18.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 18.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 17.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 16.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 15.2
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 282.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 210.9
FF:10164-103B2 76 years, female 210.9
Globus pallidus
Scaled Tags Per Million: 85.5
FF:10175-103C4 60 years, female 113.6
FF:10161-103A8 76 years, female 57.4
Nucleus accumbens
Scaled Tags Per Million: 115.3
FF:10037-101F1 23-56 years, mixed 115.3
Putamen
Scaled Tags Per Million: 282.7
FF:10176-103C5 60 years, female 282.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 327.2
Pig sample Sample description nTPM
Caudate
nTPM: 314.9
Samples: 4

Max nTPM: 381.7
Min nTPM: 206.5
Sample A Female 361.6
Sample B Female 381.7
Sample C Male 309.9
Sample D Male 206.5
Putamen
nTPM: 130.8
Samples: 4

Max nTPM: 192.1
Min nTPM: 61.1
Sample A Female 192.1
Sample B Female 116.5
Sample C Male 61.1
Sample D Male 153.4
Septum
nTPM: 232.7
Samples: 4

Max nTPM: 440.8
Min nTPM: 48.2
Sample A Female 440.8
Sample B Female 366.6
Sample C Male 48.2
Sample D Male 75.2
Ventral pallidum
nTPM: 327.2
Samples: 4

Max nTPM: 445.7
Min nTPM: 154.3
Sample A Female 445.7
Sample B Female 372.9
Sample C Male 154.3
Sample D Male 335.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 191.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 96.3
Samples: 4

Max nTPM: 120.6
Min nTPM: 60.8
Sample A Male 94.9
Sample B Male 120.6
Sample C Female 60.8
Sample D Female 108.9
Septum
nTPM: 74.5
Samples: 4

Max nTPM: 82.8
Min nTPM: 64.6
Sample A Male 75.3
Sample B Male 82.8
Sample C Female 75.2
Sample D Female 64.6
Ventral forebrain
nTPM: 191.0
Samples: 4

Max nTPM: 248.1
Min nTPM: 142.7
Sample A Male 168.5
Sample B Male 204.5
Sample C Female 248.1
Sample D Female 142.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 9.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 9.3
74881161 Antisense, RP_060220_01_A10, Mouse strain C57BL/6J (56 days, male) 10.1
68924527 Antisense, RP_050303_02_E06, Mouse strain C57BL/6J (56 days, male) 8.5
Pallidum
Expression energy: 7.2
74881161 Antisense, RP_060220_01_A10, Mouse strain C57BL/6J (56 days, male) 7.6
68924527 Antisense, RP_050303_02_E06, Mouse strain C57BL/6J (56 days, male) 6.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.