HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:35.9 nTPM
HPA:35.9 nTPM
GTEx:27.9 nTPM
FANTOM5:109.0 Scaled Tags Per Million
Pig:83.5 nTPM
Mouse:79.0 nTPM
Allen mouse:5.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029128
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.9
Sample id Sample description nTPM
Hippocampus
nTPM: 30.9
1898 Male, age 80, left hemisphere 36.2
2529 Female, age 94, left hemisphere 34.2
2148 Female, age 91, left hemisphere 30.7
1855 Male, age 76, left hemisphere 28.7
1911 Female, age 85, right hemisphere 27.7
2621 Female, age 67, right hemisphere 27.7
Dentate gyrus
nTPM: 29.4
2528 Male, age 74, both hemispheres 40.0
2246 Female, age 85, both hemispheres 31.5
2530 Female, age 94, left hemisphere 30.8
2010 Male, age 76, both hemispheres 29.0
1927 Female, age 91, both hemispheres 24.2
2531 Female, age 67, both hemispheres 20.9
Entorhinal gyrus
nTPM: 35.9
1787 Male, age 76, left hemisphere 43.2
2613 Female, age 94, left hemisphere 39.4
2117 Female, age 91, right hemisphere 39.2
1938 Female, age 85, left hemisphere 35.5
2764 Male, age 80, right hemisphere 33.0
2686 Male, age 75, right hemisphere 25.4
Hippocampus, CA1
nTPM: 29.8
2527 Male, age 74, both hemispheres 39.1
2082 Female, age 91, right hemisphere 33.7
2749 Male, age 80, left hemisphere 27.5
1873 Female, age 85, both hemispheres 25.8
2045 Male, age 76, both hemispheres 22.7
Hippocampus, CA2
nTPM: 32.5
2249 Male, age 74, both hemispheres 40.3
2437 Female, age 94, left hemisphere 34.8
2113 Female, age 91, right hemisphere 31.7
1892 Male, age 76, both hemispheres 29.9
1940 Female, age 85, left hemisphere 29.1
1963 Male, age 80, left hemisphere 29.1
Hippocampus, CA3
nTPM: 29.5
2436 Male, age 74, both hemispheres 38.5
1891 Female, age 85, both hemispheres 29.2
2137 Male, age 80, left hemisphere 28.4
1867 Male, age 76, both hemispheres 28.2
2620 Female, age 94, left hemisphere 26.8
2861 Female, age 67, both hemispheres 26.1
Parahippocampal cortex
nTPM: 31.1
2250 Female, age 67, right hemisphere 38.1
2692 Male, age 74, both hemispheres 36.2
1990 Female, age 91, right hemisphere 35.1
2622 Female, age 67, right hemisphere 31.8
2245 Female, age 91, both hemispheres 30.5
1850 Male, age 80, both hemispheres 29.0
1933 Female, age 85, both hemispheres 29.0
2018 Male, age 76, both hemispheres 27.7
2693 Female, age 94, both hemispheres 27.3
2532 Female, age 72, left hemisphere 26.4
Perirhinal gyrus
nTPM: 34.9
1794 Male, age 80, right hemisphere 40.6
1847 Female, age 91, left hemisphere 39.5
1841 Female, age 85, right hemisphere 35.2
2521 Female, age 94, right hemisphere 33.5
2848 Male, age 76, right hemisphere 25.8
Subiculum
nTPM: 34.3
2619 Male, age 74, both hemispheres 41.7
2438 Female, age 94, left hemisphere 36.8
1977 Female, age 85, both hemispheres 36.4
2729 Female, age 91, right hemisphere 34.0
1901 Male, age 80, both hemispheres 31.1
2042 Male, age 76, both hemispheres 25.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.9
Samples: 197

Max nTPM: 96.6
Min nTPM: 2.8
Std nTPM: 11.6
Median nTPM: 27.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 96.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 62.4
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 59.6
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 57.2
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 55.9
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 51.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 50.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 49.2
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 48.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 48.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 46.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 109.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 109.0
FF:10153-102I9 76 years, female 115.5
FF:10169-103B7 60 years, female 102.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 83.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 60.1
Samples: 4

Max nTPM: 87.6
Min nTPM: 32.4
Sample A Female 87.6
Sample B Female 75.6
Sample C Male 44.6
Sample D Male 32.4
Entorhinal cortex
nTPM: 74.4
Samples: 4

Max nTPM: 112.8
Min nTPM: 53.0
Sample A Female 112.8
Sample B Female 55.0
Sample C Male 76.6
Sample D Male 53.0
Subiculum
nTPM: 83.5
Samples: 4

Max nTPM: 119.7
Min nTPM: 65.8
Sample A Female 119.7
Sample B Female 79.0
Sample C Male 65.8
Sample D Male 69.4
Ventral hippocampus
nTPM: 55.9
Samples: 4

Max nTPM: 95.4
Min nTPM: 35.2
Sample A Female 45.9
Sample B Female 35.2
Sample C Male 47.1
Sample D Male 95.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 79.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 79.0
Samples: 4

Max nTPM: 110.1
Min nTPM: 63.6
Sample A Male 63.6
Sample B Male 66.3
Sample C Female 76.0
Sample D Female 110.1
Hippocampal formation
nTPM: 61.0
Samples: 4

Max nTPM: 68.6
Min nTPM: 54.6
Sample A Male 54.6
Sample B Male 54.6
Sample C Female 66.1
Sample D Female 68.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.5
74881161 Antisense, RP_060220_01_A10, Mouse strain C57BL/6J (56 days, male) 5.8
68924527 Antisense, RP_050303_02_E06, Mouse strain C57BL/6J (56 days, male) 5.2

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The Human Protein Atlas

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