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RPS13
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  • RPS13
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:447.7 nTPM
FANTOM5:137.4 Scaled Tags Per Million
Pig:152.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA005985
Glial cells Not detected
Neuronal cells Low



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 447.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 447.7
Samples: 246

Max nTPM: 1270.5
Min nTPM: 215.6
Std nTPM: 132.4
Median nTPM: 418.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1270.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1022.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 958.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 932.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 892.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 858.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 758.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 746.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 712.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 708.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 689.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 683.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 678.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 671.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 644.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 635.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 625.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 619.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 616.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 605.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 605.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 604.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 591.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 589.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 585.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 582.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 576.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 570.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 570.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 569.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 567.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 566.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 557.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 556.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 555.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 550.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 550.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 547.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 546.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 546.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 541.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 535.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 535.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 534.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 534.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 534.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 532.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 530.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 529.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 528.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 527.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 526.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 524.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 524.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 523.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 521.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 519.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 519.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 511.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 511.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 511.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 508.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 506.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 505.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 505.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 503.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 501.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 500.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 500.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 499.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 497.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 497.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 492.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 491.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 483.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 479.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 476.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 476.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 475.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 471.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 470.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 470.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 469.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 468.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 468.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 467.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 466.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 464.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 462.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 457.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 457.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 456.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 455.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 453.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 448.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 447.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 447.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 446.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 444.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 444.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 441.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 440.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 440.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 440.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 439.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 437.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 435.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 434.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 432.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 432.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 431.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 430.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 429.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 428.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 428.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 427.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 426.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 425.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 423.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 420.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 420.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 419.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 419.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 416.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 416.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 415.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 415.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 413.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 413.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 413.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 412.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 412.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 411.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 410.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 410.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 409.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 405.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 405.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 404.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 404.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 402.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 401.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 401.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 399.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 399.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 397.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 396.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 396.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 395.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 395.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 393.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 393.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 392.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 392.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 390.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 389.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 386.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 385.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 385.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 385.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 384.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 383.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 383.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 382.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 382.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 381.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 381.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 378.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 378.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 377.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 377.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 377.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 376.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 375.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 374.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 373.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 373.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 372.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 371.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 365.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 365.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 364.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 364.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 364.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 363.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 362.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 361.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 360.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 360.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 359.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 358.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 357.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 356.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 355.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 354.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 354.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 353.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 353.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 352.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 350.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 349.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 346.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 346.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 344.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 344.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 341.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 340.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 339.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 339.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 335.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 333.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 332.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 329.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 329.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 328.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 327.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 326.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 325.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 325.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 324.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 323.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 321.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 313.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 312.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 309.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 309.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 308.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 308.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 307.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 304.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 300.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 299.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 298.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 297.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 292.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 289.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 288.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 287.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 283.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 283.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 282.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 280.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 278.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 262.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 256.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 215.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 137.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 137.4
FF:10164-103B2 76 years, female 137.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 152.7
Pig sample Sample description nTPM
Caudate
nTPM: 152.7
Samples: 4

Max nTPM: 203.5
Min nTPM: 120.9
Sample A Female 120.9
Sample B Female 145.2
Sample C Male 203.5
Sample D Male 141.0

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