HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:37.0 nTPM
HPA:37.0 nTPM
GTEx:39.8 nTPM
FANTOM5:183.2 Scaled Tags Per Million
Pig:52.5 nTPM
Mouse:55.0 nTPM
Allen mouse:17.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001814Antibody CAB002013
Glial cells LowMedium
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.0
Sample id Sample description nTPM
Hippocampus
nTPM: 32.7
1898 Male, age 80, left hemisphere 46.1
2529 Female, age 94, left hemisphere 40.0
1855 Male, age 76, left hemisphere 35.2
2621 Female, age 67, right hemisphere 32.0
2148 Female, age 91, left hemisphere 29.3
1911 Female, age 85, right hemisphere 13.6
Dentate gyrus
nTPM: 37.0
2010 Male, age 76, both hemispheres 69.9
2530 Female, age 94, left hemisphere 39.9
2528 Male, age 74, both hemispheres 37.7
2246 Female, age 85, both hemispheres 28.2
1927 Female, age 91, both hemispheres 27.5
2531 Female, age 67, both hemispheres 19.0
Entorhinal gyrus
nTPM: 27.7
2686 Male, age 75, right hemisphere 40.9
1938 Female, age 85, left hemisphere 30.7
2764 Male, age 80, right hemisphere 30.6
2117 Female, age 91, right hemisphere 29.5
1787 Male, age 76, left hemisphere 22.8
2613 Female, age 94, left hemisphere 11.9
Hippocampus, CA1
nTPM: 29.2
2527 Male, age 74, both hemispheres 40.8
2082 Female, age 91, right hemisphere 29.3
1873 Female, age 85, both hemispheres 28.8
2045 Male, age 76, both hemispheres 28.2
2749 Male, age 80, left hemisphere 18.6
Hippocampus, CA2
nTPM: 33.5
2249 Male, age 74, both hemispheres 64.0
2437 Female, age 94, left hemisphere 33.5
1963 Male, age 80, left hemisphere 32.1
1940 Female, age 85, left hemisphere 31.3
2113 Female, age 91, right hemisphere 24.1
1892 Male, age 76, both hemispheres 16.1
Hippocampus, CA3
nTPM: 31.1
2436 Male, age 74, both hemispheres 75.1
1867 Male, age 76, both hemispheres 38.5
2137 Male, age 80, left hemisphere 27.5
1891 Female, age 85, both hemispheres 16.1
2620 Female, age 94, left hemisphere 15.1
2861 Female, age 67, both hemispheres 14.4
Parahippocampal cortex
nTPM: 27.4
2018 Male, age 76, both hemispheres 48.0
2250 Female, age 67, right hemisphere 47.5
2532 Female, age 72, left hemisphere 29.3
2245 Female, age 91, both hemispheres 26.3
1933 Female, age 85, both hemispheres 25.8
1990 Female, age 91, right hemisphere 25.6
2692 Male, age 74, both hemispheres 21.1
1850 Male, age 80, both hemispheres 20.5
2622 Female, age 67, right hemisphere 15.3
2693 Female, age 94, both hemispheres 14.4
Perirhinal gyrus
nTPM: 22.3
1847 Female, age 91, left hemisphere 35.9
1841 Female, age 85, right hemisphere 31.0
2521 Female, age 94, right hemisphere 24.7
1794 Male, age 80, right hemisphere 17.3
2848 Male, age 76, right hemisphere 2.4
Subiculum
nTPM: 26.3
1977 Female, age 85, both hemispheres 30.8
2042 Male, age 76, both hemispheres 30.5
1901 Male, age 80, both hemispheres 26.8
2619 Male, age 74, both hemispheres 25.9
2729 Female, age 91, right hemisphere 22.5
2438 Female, age 94, left hemisphere 21.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.8
Samples: 197

Max nTPM: 347.7
Min nTPM: 10.7
Std nTPM: 45.4
Median nTPM: 25.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 347.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 243.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 239.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 224.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 202.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 194.6
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 171.0
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 157.0
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 154.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 152.9
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 148.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 183.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 183.2
FF:10169-103B7 60 years, female 218.6
FF:10153-102I9 76 years, female 147.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 46.8
Samples: 4

Max nTPM: 54.5
Min nTPM: 37.1
Sample A Female 54.5
Sample B Female 47.0
Sample C Male 48.7
Sample D Male 37.1
Entorhinal cortex
nTPM: 48.2
Samples: 4

Max nTPM: 56.0
Min nTPM: 40.7
Sample A Female 44.8
Sample B Female 56.0
Sample C Male 51.2
Sample D Male 40.7
Subiculum
nTPM: 52.5
Samples: 4

Max nTPM: 69.6
Min nTPM: 43.2
Sample A Female 69.6
Sample B Female 46.4
Sample C Male 50.7
Sample D Male 43.2
Ventral hippocampus
nTPM: 47.8
Samples: 4

Max nTPM: 58.9
Min nTPM: 40.3
Sample A Female 50.6
Sample B Female 40.3
Sample C Male 58.9
Sample D Male 41.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 55.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 55.0
Samples: 4

Max nTPM: 59.0
Min nTPM: 51.7
Sample A Male 54.9
Sample B Male 54.3
Sample C Female 51.7
Sample D Female 59.0
Hippocampal formation
nTPM: 48.4
Samples: 4

Max nTPM: 49.1
Min nTPM: 47.2
Sample A Male 48.5
Sample B Male 48.7
Sample C Female 49.1
Sample D Female 47.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.7
634450 Antisense, RP_040907_02_H11, Mouse strain C57BL/6J (56 days, male) 17.7

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