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RPS12
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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1445.0 nTPM
HPA:1445.0 nTPM
FANTOM5:363.6 Scaled Tags Per Million
Pig:334.1 nTPM

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 1445.0
Sample id Sample description nTPM
Area postrema
nTPM: 1419.1
2799 Male, age 61, both hemispheres 1479.2
2306 Male, age 80, both hemispheres 1445.6
2054 Male, age 76, both hemispheres 1332.5
Cuneate nuclei
nTPM: 1387.9
2381 Male, age 80, both hemispheres 1423.1
2376 Male, age 61, both hemispheres 1420.1
2131 Male, age 76, both hemispheres 1320.6
Dorsal medullary reticular nucleus
nTPM: 1383.6
2373 Male, age 61, both hemispheres 1427.9
2040 Female, age 85, both hemispheres 1383.8
2088 Male, age 76, both hemispheres 1339.3
Dorsal motor vagal complex
nTPM: 1404.9
2797 Male, age 61, both hemispheres 1543.0
2807 Female, age 85, both hemispheres 1445.5
2643 Male, age 74, both hemispheres 1433.6
2844 Male, age 55, unknown 1384.4
2133 Female, age 91, both hemispheres 1379.4
2185 Male, age 76, both hemispheres 1354.5
2000 Male, age 74, unknown 1351.5
2813 Female, age 72, unknown 1347.1
Gigantocellular reticular nuclei, medullary
nTPM: 1384.7
2314 Male, age 61, both hemispheres 1436.7
2387 Female, age 91, both hemispheres 1411.4
1876 Female, age 85, both hemispheres 1391.4
2310 Male, age 80, both hemispheres 1371.2
2022 Male, age 76, right hemisphere 1361.4
2462 Male, age 74, both hemispheres 1336.3
Gigantocellular reticular nuclei, pars
nTPM: 1355.8
2084 Female, age 85, both hemispheres 1378.4
2336 Male, age 61, both hemispheres 1360.4
2706 Male, age 80, both hemispheres 1359.1
2330 Male, age 80, both hemispheres 1352.6
2168 Male, age 76, both hemispheres 1328.6
Inferior olive
nTPM: 1417.0
2379 Male, age 80, both hemispheres 1425.7
2563 Male, age 74, both hemispheres 1423.2
2178 Male, age 61, both hemispheres 1418.6
2628 Female, age 91, both hemispheres 1413.1
2085 Female, age 85, both hemispheres 1404.4
Lateral medullary reticular nucleus
nTPM: 1413.8
2190 Female, age 85, both hemispheres 1446.2
2852 Male, age 80, both hemispheres 1437.9
2804 Female, age 91, both hemispheres 1437.0
2374 Male, age 61, both hemispheres 1403.3
2305 Male, age 74, both hemispheres 1398.6
2044 Male, age 76, both hemispheres 1359.9
Medial vestibular nucleus
nTPM: 1371.2
2803 Female, age 91, both hemispheres 1418.7
2624 Male, age 61, both hemispheres 1386.6
2801 Male, age 74, both hemispheres 1380.3
2093 Male, age 80, both hemispheres 1361.1
2743 Female, age 85, both hemispheres 1354.1
2134 Male, age 76, both hemispheres 1326.1
Motor hypoglossal nucleus
nTPM: 1369.7
2132 Female, age 85, both hemispheres 1407.2
2125 Female, age 91, both hemispheres 1401.4
2182 Male, age 80, both hemispheres 1396.7
2461 Male, age 61, both hemispheres 1324.8
2277 Male, age 76, both hemispheres 1318.3
Nucleus ambiguus
nTPM: 1361.0
2071 Male, age 76, both hemispheres 1403.1
2096 Female, age 85, both hemispheres 1318.8
Nucleus cuneatus
nTPM: 1423.3
2808 Female, age 85, both hemispheres 1478.6
2805 Female, age 91, both hemispheres 1450.9
2380 Male, age 80, both hemispheres 1444.4
2564 Male, age 74, both hemispheres 1430.5
2562 Male, age 61, both hemispheres 1404.9
2100 Male, age 76, both hemispheres 1330.7
Nucleus gracilis
nTPM: 1445.0
2382 Male, age 80, both hemispheres 1471.0
2299 Female, age 85, both hemispheres 1450.9
2627 Male, age 74, both hemispheres 1413.2
Nucleus raphe magnus
nTPM: 1347.1
2459 Female, age 91, both hemispheres 1374.1
2051 Male, age 76, both hemispheres 1357.4
2328 Male, age 80, both hemispheres 1355.5
2455 Male, age 74, both hemispheres 1344.4
2160 Male, age 61, both hemispheres 1329.4
2172 Female, age 85, both hemispheres 1321.5
Nucleus raphe obscurus
nTPM: 1428.8
2845 Female, age 85, midline 1442.0
2800 Male, age 61, midline 1429.2
2142 Male, age 76, midline 1415.2
Nucleus raphe pallidus
nTPM: 1418.6
1924 Male, age 61, midline 1451.3
2145 Male, age 76, midline 1402.7
2183 Male, age 80, midline 1401.6
Nucleus tractus solitarii
nTPM: 1352.1
2191 Female, age 85, both hemispheres 1391.5
2144 Female, age 91, right hemisphere 1353.0
2656 Male, age 76, both hemispheres 1332.0
2307 Male, age 80, both hemispheres 1331.7
Parvicellular reticular nuclei
nTPM: 1375.1
2119 Male, age 80, both hemispheres 1382.8
2095 Male, age 76, both hemispheres 1380.6
2558 Male, age 74, both hemispheres 1362.0
Parvicellular reticular nuclei, medullary
nTPM: 1376.4
2181 Male, age 80, left hemisphere 1382.0
2189 Female, age 91, both hemispheres 1381.6
2091 Female, age 85, both hemispheres 1365.5
Peritrigeminal nucleus
nTPM: 1403.0
2067 Female, age 85, both hemispheres 1450.5
2136 Male, age 76, both hemispheres 1390.7
2179 Male, age 61, both hemispheres 1367.7
Prepositus hypoglossal nucleus
nTPM: 1390.1
2855 Female, age 85, right hemisphere 1414.6
2086 Male, age 80, both hemispheres 1365.5
Spinal trigeminal nucleus, caudal
nTPM: 1378.0
2642 Male, age 74, both hemispheres 1400.3
2308 Male, age 80, both hemispheres 1389.5
2390 Female, age 91, both hemispheres 1383.1
2312 Male, age 61, both hemispheres 1377.7
2447 Male, age 76, both hemispheres 1339.3
Spinal trigeminal nucleus, interpolar
nTPM: 1380.9
2389 Female, age 91, both hemispheres 1412.8
2033 Male, age 80, both hemispheres 1393.9
2386 Female, age 85, both hemispheres 1388.3
2066 Male, age 76, right hemisphere 1358.2
2625 Male, age 61, both hemispheres 1351.4
Spinal vestibular nucleus
nTPM: 1417.5
2384 Male, age 74, both hemispheres 1494.9
2806 Female, age 85, both hemispheres 1425.0
2796 Male, age 61, both hemispheres 1413.3
2186 Female, age 91, both hemispheres 1397.6
2780 Male, age 80, both hemispheres 1393.8
2748 Male, age 76, both hemispheres 1380.1
Ventral medullary reticular nucleus
nTPM: 1392.8
2372 Male, age 61, both hemispheres 1431.2
2060 Male, age 76, both hemispheres 1354.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 1409.7
2118 Male, age 80, both hemispheres 1438.9
2302 Female, age 91, both hemispheres 1427.3
2741 Female, age 85, both hemispheres 1402.7
2180 Male, age 61, both hemispheres 1394.9
1986 Male, age 76, both hemispheres 1384.5

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 363.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 363.6
FF:10174-103C3 60 years, female 460.1
FF:10155-103A2 76 years, female 350.4
FF:10038-101F2 18-64 years, mixed 280.2

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 334.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 334.1
Samples: 4

Max nTPM: 422.4
Min nTPM: 238.7
Sample A Female 238.7
Sample B Female 276.1
Sample C Male 399.2
Sample D Male 422.4

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.