PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:1370.4 nTPM
HPA:1370.4 nTPM
FANTOM5:2580.5 Scaled Tags Per Million
Pig:776.0 nTPM
Mouse:1728.8 nTPM
Allen mouse:8.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 1370.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 695.1
2301 Female, age 85, both hemispheres 1181.9
2090 Male, age 80, both hemispheres 606.3
2188 Female, age 91, both hemispheres 538.4
1984 Male, age 76, both hemispheres 453.7
Area postrema
nTPM: 902.9
2799 Male, age 61, both hemispheres 1363.0
2054 Male, age 76, both hemispheres 749.8
2306 Male, age 80, both hemispheres 596.0
Cuneate nuclei
nTPM: 504.7
2376 Male, age 61, both hemispheres 720.6
2381 Male, age 80, both hemispheres 489.8
2131 Male, age 76, both hemispheres 303.7
Dorsal cochlear nucleus
nTPM: 694.7
2187 Female, age 91, both hemispheres 966.8
2802 Male, age 74, right hemisphere 728.3
2370 Male, age 61, both hemispheres 694.8
2378 Male, age 80, both hemispheres 577.9
2058 Male, age 76, both hemispheres 505.7
Dorsal medullary reticular nucleus
nTPM: 748.8
2373 Male, age 61, both hemispheres 901.9
2040 Female, age 85, both hemispheres 850.8
2088 Male, age 76, both hemispheres 493.8
Dorsal motor vagal complex
nTPM: 625.9
2000 Male, age 74, unknown 822.1
2813 Female, age 72, unknown 736.3
2797 Male, age 61, both hemispheres 702.1
2844 Male, age 55, unknown 665.2
2133 Female, age 91, both hemispheres 655.9
2643 Male, age 74, both hemispheres 564.2
2807 Female, age 85, both hemispheres 505.6
2185 Male, age 76, both hemispheres 355.4
Dorsal tegmental nucleus
nTPM: 1020.6
2083 Male, age 80, both hemispheres 1114.2
1936 Male, age 76, left hemisphere 1047.2
2326 Male, age 74, both hemispheres 982.1
2358 Male, age 61, both hemispheres 939.0
Dorsolateral tegmental area
nTPM: 880.7
2360 Male, age 74, both hemispheres 970.8
2654 Male, age 80, both hemispheres 967.0
2141 Male, age 76, both hemispheres 950.9
2751 Female, age 85, both hemispheres 768.6
2337 Male, age 61, both hemispheres 746.3
Gigantocellular reticular nuclei, medullary
nTPM: 676.4
2314 Male, age 61, both hemispheres 1225.2
1876 Female, age 85, both hemispheres 760.9
2387 Female, age 91, both hemispheres 683.9
2462 Male, age 74, both hemispheres 560.1
2310 Male, age 80, both hemispheres 546.6
2022 Male, age 76, right hemisphere 281.8
Gigantocellular reticular nuclei, pars
nTPM: 707.4
2084 Female, age 85, both hemispheres 945.2
2336 Male, age 61, both hemispheres 858.0
2330 Male, age 80, both hemispheres 640.2
2706 Male, age 80, both hemispheres 618.3
2168 Male, age 76, both hemispheres 475.2
Inferior olive
nTPM: 1370.4
2085 Female, age 85, both hemispheres 1686.0
2563 Male, age 74, both hemispheres 1449.9
2379 Male, age 80, both hemispheres 1257.3
2178 Male, age 61, both hemispheres 1235.8
2628 Female, age 91, both hemispheres 1222.8
Kolliker-Fuse nucleus
nTPM: 1060.2
2315 Male, age 76, right hemisphere 1866.3
2163 Male, age 80, both hemispheres 836.9
2793 Female, age 91, left hemisphere 477.5
Lateral lemniscal nuclei
nTPM: 424.6
2746 Female, age 85, left hemisphere 578.5
2169 Male, age 76, both hemispheres 461.9
2320 Female, age 91, left hemisphere 383.3
2036 Male, age 80, both hemispheres 359.7
2453 Male, age 74, right hemisphere 339.6
Lateral medullary reticular nucleus
nTPM: 1068.9
2374 Male, age 61, both hemispheres 1432.2
2804 Female, age 91, both hemispheres 1137.0
2190 Female, age 85, both hemispheres 1084.4
2305 Male, age 74, both hemispheres 1014.8
2852 Male, age 80, both hemispheres 947.1
2044 Male, age 76, both hemispheres 798.2
Lateral parabrachial nucleus
nTPM: 868.3
2792 Male, age 76, both hemispheres 1169.5
2139 Female, age 85, right hemisphere 836.7
2013 Male, age 80, both hemispheres 764.8
2790 Male, age 61, both hemispheres 702.2
Lateral vestibular nucleus
nTPM: 956.2
2311 Male, age 80, both hemispheres 1126.3
2184 Male, age 76, both hemispheres 786.0
Locus coeruleus
nTPM: 912.8
2317 Female, age 72, unknown 1069.1
2123 Female, age 91, both hemispheres 1003.1
2162 Male, age 80, both hemispheres 985.0
1980 Male, age 76, both hemispheres 959.1
2720 Male, age 74, both hemispheres 880.2
2014 Male, age 55, unknown 763.0
2788 Male, age 74, unknown 729.9
Medial olivary nucleus
nTPM: 1090.9
2138 Female, age 91, both hemispheres 1312.5
1943 Male, age 61, both hemispheres 1241.7
2851 Male, age 80, both hemispheres 928.4
1962 Male, age 76, both hemispheres 880.9
Medial parabrachial nucleus
nTPM: 857.5
2170 Female, age 91, both hemispheres 929.8
2156 Male, age 61, both hemispheres 929.3
2786 Male, age 76, both hemispheres 889.1
2854 Male, age 80, both hemispheres 808.4
2463 Female, age 85, right hemisphere 731.0
Medial periolivary nuclei
nTPM: 520.1
2791 Male, age 74, right hemisphere 628.7
2063 Male, age 76, both hemispheres 536.4
2458 Female, age 91, both hemispheres 504.2
2081 Male, age 80, both hemispheres 474.5
2171 Female, age 85, both hemispheres 456.8
Medial vestibular nucleus
nTPM: 971.3
2801 Male, age 74, both hemispheres 1171.0
2743 Female, age 85, both hemispheres 1134.0
2624 Male, age 61, both hemispheres 1077.5
2134 Male, age 76, both hemispheres 912.2
2093 Male, age 80, both hemispheres 769.3
2803 Female, age 91, both hemispheres 764.0
Motor facial nucleus
nTPM: 606.9
2126 Male, age 61, both hemispheres 741.7
2795 Female, age 91, both hemispheres 690.4
2697 Female, age 85, both hemispheres 633.6
2365 Male, age 74, right hemisphere 581.7
2062 Male, age 76, both hemispheres 573.4
2327 Male, age 80, both hemispheres 420.6
Motor hypoglossal nucleus
nTPM: 752.1
2461 Male, age 61, both hemispheres 899.4
2125 Female, age 91, both hemispheres 810.2
2277 Male, age 76, both hemispheres 743.5
2182 Male, age 80, both hemispheres 727.2
2132 Female, age 85, both hemispheres 580.2
Motor trigeminal nucleus
nTPM: 597.3
2309 Male, age 76, both hemispheres 778.5
2335 Male, age 61, both hemispheres 777.2
2321 Female, age 91, both hemispheres 583.1
2560 Male, age 74, both hemispheres 454.6
2079 Male, age 80, both hemispheres 393.0
Nuclei of the trapezoid body
nTPM: 577.4
2368 Female, age 91, both hemispheres 644.5
1983 Male, age 76, both hemispheres 637.4
2166 Male, age 80, both hemispheres 566.9
2159 Male, age 61, both hemispheres 560.7
2735 Female, age 85, both hemispheres 477.8
Nucleus ambiguus
nTPM: 958.5
2071 Male, age 76, both hemispheres 1120.4
2096 Female, age 85, both hemispheres 796.6
Nucleus cuneatus
nTPM: 533.5
2808 Female, age 85, both hemispheres 802.8
2562 Male, age 61, both hemispheres 620.3
2380 Male, age 80, both hemispheres 610.9
2564 Male, age 74, both hemispheres 526.1
2100 Male, age 76, both hemispheres 332.5
2805 Female, age 91, both hemispheres 308.0
Nucleus gracilis
nTPM: 598.0
2627 Male, age 74, both hemispheres 915.7
2382 Male, age 80, both hemispheres 481.9
2299 Female, age 85, both hemispheres 396.3
Nucleus raphe magnus
nTPM: 491.6
2328 Male, age 80, both hemispheres 568.6
2455 Male, age 74, both hemispheres 538.7
2160 Male, age 61, both hemispheres 528.3
2051 Male, age 76, both hemispheres 513.4
2459 Female, age 91, both hemispheres 402.1
2172 Female, age 85, both hemispheres 398.5
Nucleus raphe obscurus
nTPM: 1051.4
2845 Female, age 85, midline 1182.0
2142 Male, age 76, midline 1031.5
2800 Male, age 61, midline 940.6
Nucleus raphe pallidus
nTPM: 883.9
1924 Male, age 61, midline 1030.5
2183 Male, age 80, midline 877.0
2145 Male, age 76, midline 744.1
Nucleus tractus solitarii
nTPM: 650.4
2144 Female, age 91, right hemisphere 801.9
2191 Female, age 85, both hemispheres 783.4
2307 Male, age 80, both hemispheres 570.1
2656 Male, age 76, both hemispheres 446.2
Paramedian reticular nucleus
nTPM: 702.6
2057 Male, age 80, both hemispheres 848.4
2313 Male, age 61, both hemispheres 713.0
2052 Male, age 76, both hemispheres 639.7
2050 Female, age 85, both hemispheres 609.2
Parvicellular reticular nuclei
nTPM: 620.2
2119 Male, age 80, both hemispheres 845.9
2095 Male, age 76, both hemispheres 715.4
2558 Male, age 74, both hemispheres 299.3
Parvicellular reticular nuclei, medullary
nTPM: 641.0
2189 Female, age 91, both hemispheres 789.2
2091 Female, age 85, both hemispheres 568.9
2181 Male, age 80, left hemisphere 564.9
Peritrigeminal nucleus
nTPM: 1069.2
2067 Female, age 85, both hemispheres 1150.8
2179 Male, age 61, both hemispheres 1038.3
2136 Male, age 76, both hemispheres 1018.4
Pontine nuclei
nTPM: 445.1
2115 Male, age 80, left hemisphere 554.8
2109 Female, age 72, unknown 484.9
1968 Male, age 76, left hemisphere 455.7
1863 Male, age 55, unknown 430.4
2787 Female, age 85, both hemispheres 425.6
2319 Female, age 91, both hemispheres 420.9
2727 Male, age 61, right hemisphere 417.1
2454 Male, age 74, left hemisphere 371.8
Pontine raphe nucleus
nTPM: 797.1
2853 Male, age 76, midline 1051.0
2122 Female, age 85, midline 543.2
Posteroventral cochlear nucleus
nTPM: 651.2
2752 Female, age 85, both hemispheres 842.2
2371 Male, age 61, both hemispheres 771.0
2070 Male, age 76, both hemispheres 590.7
2341 Male, age 80, both hemispheres 563.1
2135 Female, age 91, both hemispheres 489.1
Prepositus hypoglossal nucleus
nTPM: 1073.4
2855 Female, age 85, right hemisphere 1176.0
2086 Male, age 80, both hemispheres 970.8
Principal sensory trigeminal nucleus
nTPM: 620.3
2324 Male, age 76, both hemispheres 996.6
2158 Male, age 61, both hemispheres 626.7
2008 Male, age 80, left hemisphere 453.6
2367 Female, age 91, left hemisphere 404.3
Reticular pontine nucleus, caudal
nTPM: 481.2
2092 Male, age 76, both hemispheres 643.0
2559 Male, age 74, both hemispheres 473.3
2457 Female, age 91, both hemispheres 423.7
2332 Male, age 80, right hemisphere 384.8
Reticular pontine nucleus, oral
nTPM: 651.8
1939 Male, age 80, both hemispheres 937.7
2167 Male, age 76, both hemispheres 889.7
2012 Female, age 85, both hemispheres 591.6
2366 Female, age 91, both hemispheres 433.9
2361 Male, age 74, both hemispheres 406.2
Reticulotegmental nucleus
nTPM: 709.0
2322 Female, age 91, both hemispheres 816.4
2333 Male, age 80, both hemispheres 755.1
2325 Male, age 76, both hemispheres 713.7
2452 Male, age 74, both hemispheres 550.9
Spinal trigeminal nucleus, caudal
nTPM: 627.6
2642 Male, age 74, both hemispheres 764.8
2312 Male, age 61, both hemispheres 752.2
2308 Male, age 80, both hemispheres 627.1
2390 Female, age 91, both hemispheres 604.0
2447 Male, age 76, both hemispheres 389.9
Spinal trigeminal nucleus, interpolar
nTPM: 651.7
2625 Male, age 61, both hemispheres 790.4
2066 Male, age 76, right hemisphere 687.8
2389 Female, age 91, both hemispheres 669.9
2033 Male, age 80, both hemispheres 668.6
2386 Female, age 85, both hemispheres 441.8
Spinal trigeminal nucleus, oral
nTPM: 582.9
2737 Female, age 85, both hemispheres 659.2
2164 Male, age 80, both hemispheres 615.5
1978 Male, age 76, both hemispheres 474.0
Spinal vestibular nucleus
nTPM: 822.9
2806 Female, age 85, both hemispheres 1027.1
2748 Male, age 76, both hemispheres 854.7
2780 Male, age 80, both hemispheres 827.2
2796 Male, age 61, both hemispheres 798.2
2186 Female, age 91, both hemispheres 742.4
2384 Male, age 74, both hemispheres 688.0
Subcoeruleus area
nTPM: 770.1
2323 Female, age 91, left hemisphere 906.4
2451 Male, age 74, both hemispheres 852.2
1958 Male, age 80, both hemispheres 775.2
2369 Female, age 85, left hemisphere 770.7
2089 Male, age 76, left hemisphere 546.1
Superior olive
nTPM: 533.2
2364 Male, age 74, right hemisphere 666.1
2561 Female, age 91, both hemispheres 530.9
2020 Male, age 76, both hemispheres 500.2
2329 Male, age 80, right hemisphere 496.6
1875 Female, age 85, both hemispheres 472.3
Superior vestibular nucleus
nTPM: 1224.8
2061 Male, age 76, both hemispheres 1404.6
2383 Male, age 74, both hemispheres 1304.6
2015 Male, age 80, both hemispheres 965.1
Ventral medullary reticular nucleus
nTPM: 892.1
2372 Male, age 61, both hemispheres 1139.0
2060 Male, age 76, both hemispheres 645.2
Ventral periolivary nuclei
nTPM: 517.6
2130 Female, age 85, both hemispheres 596.6
2165 Male, age 80, both hemispheres 563.2
2023 Male, age 76, both hemispheres 473.1
2794 Female, age 91, left hemisphere 437.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 894.2
2180 Male, age 61, both hemispheres 1021.8
2302 Female, age 91, both hemispheres 1002.5
2741 Female, age 85, both hemispheres 862.9
1986 Male, age 76, both hemispheres 861.5
2118 Male, age 80, both hemispheres 722.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 628.9
2359 Male, age 61, both hemispheres 884.4
2840 Female, age 85, both hemispheres 710.4
2456 Female, age 91, both hemispheres 591.1
1959 Male, age 76, both hemispheres 563.3
2161 Male, age 80, both hemispheres 546.1
2449 Male, age 74, both hemispheres 478.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 2580.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 2580.5
FF:10165-103B3 76 years, female 2912.2
FF:10182-103D2 60 years, female 2248.8
Medulla oblongata
Scaled Tags Per Million: 2135.1
FF:10038-101F2 18-64 years, mixed 2752.7
FF:10155-103A2 76 years, female 2364.9
FF:10174-103C3 60 years, female 1287.7
Pons
Scaled Tags Per Million: 1440.1
FF:10033-101E6 18-54 years, mixed 1440.1

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 776.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 776.0
Samples: 4

Max nTPM: 825.1
Min nTPM: 651.0
Sample A Female 651.0
Sample B Female 825.1
Sample C Male 809.0
Sample D Male 818.8
Pons
nTPM: 737.8
Samples: 4

Max nTPM: 885.8
Min nTPM: 567.9
Sample A Female 732.4
Sample B Female 567.9
Sample C Male 765.2
Sample D Male 885.8

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 1728.8
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 1728.8
Samples: 4

Max nTPM: 1932.3
Min nTPM: 1521.5
Sample A Male 1650.5
Sample B Male 1521.5
Sample C Female 1932.3
Sample D Female 1811.0

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 8.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 7.6
73788443 Antisense, RP_051213_01_B02, Mouse strain C57BL/6J (56 days, male) 8.5
73512200 Antisense, RP_050712_04_F12, Mouse strain C57BL/6J (56 days, male) 7.2
70429441 Antisense, RP_050614_01_F09, Mouse strain C57BL/6J (56 days, male) 7.1
70918880 Antisense, RP_050712_04_F12, Mouse strain C57BL/6J (56 days, male) 2.6
Pons
Expression energy: 8.2
73788443 Antisense, RP_051213_01_B02, Mouse strain C57BL/6J (56 days, male) 9.7
73512200 Antisense, RP_050712_04_F12, Mouse strain C57BL/6J (56 days, male) 7.9
70429441 Antisense, RP_050614_01_F09, Mouse strain C57BL/6J (56 days, male) 7.1
70918880 Antisense, RP_050712_04_F12, Mouse strain C57BL/6J (56 days, male) 3.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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