HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:45.6 nTPM
HPA:45.6 nTPM
GTEx:46.8 nTPM
FANTOM5:49.8 Scaled Tags Per Million
Pig:65.1 nTPM
Mouse:51.1 nTPM
Allen mouse:4.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041189
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.6
Sample id Sample description nTPM
Hippocampus
nTPM: 40.6
1898 Male, age 80, left hemisphere 44.0
1855 Male, age 76, left hemisphere 41.3
2621 Female, age 67, right hemisphere 41.2
2529 Female, age 94, left hemisphere 39.5
1911 Female, age 85, right hemisphere 39.3
2148 Female, age 91, left hemisphere 37.9
Dentate gyrus
nTPM: 40.8
2530 Female, age 94, left hemisphere 44.1
2010 Male, age 76, both hemispheres 43.0
1927 Female, age 91, both hemispheres 40.4
2246 Female, age 85, both hemispheres 39.7
2531 Female, age 67, both hemispheres 39.2
2528 Male, age 74, both hemispheres 38.2
Entorhinal gyrus
nTPM: 42.6
1938 Female, age 85, left hemisphere 43.8
1787 Male, age 76, left hemisphere 43.6
2613 Female, age 94, left hemisphere 42.7
2764 Male, age 80, right hemisphere 42.7
2686 Male, age 75, right hemisphere 41.7
2117 Female, age 91, right hemisphere 41.3
Hippocampus, CA1
nTPM: 41.9
2045 Male, age 76, both hemispheres 44.3
2749 Male, age 80, left hemisphere 44.1
1873 Female, age 85, both hemispheres 41.0
2082 Female, age 91, right hemisphere 40.9
2527 Male, age 74, both hemispheres 39.1
Hippocampus, CA2
nTPM: 41.5
1940 Female, age 85, left hemisphere 43.6
1892 Male, age 76, both hemispheres 43.0
2249 Male, age 74, both hemispheres 42.2
2113 Female, age 91, right hemisphere 40.4
1963 Male, age 80, left hemisphere 39.9
2437 Female, age 94, left hemisphere 39.9
Hippocampus, CA3
nTPM: 40.2
2436 Male, age 74, both hemispheres 42.6
2137 Male, age 80, left hemisphere 41.7
1867 Male, age 76, both hemispheres 41.3
1891 Female, age 85, both hemispheres 39.4
2861 Female, age 67, both hemispheres 38.5
2620 Female, age 94, left hemisphere 37.8
Parahippocampal cortex
nTPM: 42.0
1933 Female, age 85, both hemispheres 44.6
1850 Male, age 80, both hemispheres 43.8
2250 Female, age 67, right hemisphere 43.7
2532 Female, age 72, left hemisphere 43.1
2018 Male, age 76, both hemispheres 42.9
2245 Female, age 91, both hemispheres 42.5
1990 Female, age 91, right hemisphere 42.3
2622 Female, age 67, right hemisphere 39.8
2693 Female, age 94, both hemispheres 39.3
2692 Male, age 74, both hemispheres 38.2
Perirhinal gyrus
nTPM: 45.6
1847 Female, age 91, left hemisphere 47.6
1841 Female, age 85, right hemisphere 47.0
1794 Male, age 80, right hemisphere 45.9
2848 Male, age 76, right hemisphere 44.4
2521 Female, age 94, right hemisphere 43.2
Subiculum
nTPM: 40.5
1977 Female, age 85, both hemispheres 43.4
2438 Female, age 94, left hemisphere 42.0
1901 Male, age 80, both hemispheres 40.0
2729 Female, age 91, right hemisphere 39.7
2042 Male, age 76, both hemispheres 39.4
2619 Male, age 74, both hemispheres 38.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.8
Samples: 197

Max nTPM: 97.8
Min nTPM: 23.6
Std nTPM: 9.6
Median nTPM: 46.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 97.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 73.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 66.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 66.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 65.6
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 64.4
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 63.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 62.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 62.6
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 62.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 61.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.8
FF:10169-103B7 60 years, female 50.2
FF:10153-102I9 76 years, female 49.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 65.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 65.1
Samples: 4

Max nTPM: 79.1
Min nTPM: 52.1
Sample A Female 79.1
Sample B Female 61.8
Sample C Male 67.4
Sample D Male 52.1
Entorhinal cortex
nTPM: 58.6
Samples: 4

Max nTPM: 64.0
Min nTPM: 49.2
Sample A Female 61.9
Sample B Female 64.0
Sample C Male 59.3
Sample D Male 49.2
Subiculum
nTPM: 63.6
Samples: 4

Max nTPM: 84.3
Min nTPM: 52.4
Sample A Female 84.3
Sample B Female 59.0
Sample C Male 58.5
Sample D Male 52.4
Ventral hippocampus
nTPM: 62.7
Samples: 4

Max nTPM: 73.9
Min nTPM: 51.9
Sample A Female 58.1
Sample B Female 51.9
Sample C Male 73.9
Sample D Male 66.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 51.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.1
Samples: 4

Max nTPM: 50.1
Min nTPM: 39.9
Sample A Male 39.9
Sample B Male 40.6
Sample C Female 45.8
Sample D Female 50.1
Hippocampal formation
nTPM: 51.1
Samples: 4

Max nTPM: 56.3
Min nTPM: 49.1
Sample A Male 49.6
Sample B Male 49.1
Sample C Female 56.3
Sample D Female 49.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.9
68269502 Antisense, RP_041129_01_F11, Mouse strain C57BL/6J (56 days, male) 4.9

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