HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:156.2 nTPM
HPA:156.2 nTPM
GTEx:130.5 nTPM
FANTOM5:814.8 Scaled Tags Per Million
Pig:294.7 nTPM
Mouse:238.1 nTPM
Allen mouse:6.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012685Antibody HPA013149
Glial cells MediumNot detected
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 156.2
Sample id Sample description nTPM
Hippocampus
nTPM: 143.4
2529 Female, age 94, left hemisphere 181.1
1898 Male, age 80, left hemisphere 155.4
2148 Female, age 91, left hemisphere 152.4
2621 Female, age 67, right hemisphere 130.8
1911 Female, age 85, right hemisphere 125.4
1855 Male, age 76, left hemisphere 115.3
Dentate gyrus
nTPM: 128.7
2530 Female, age 94, left hemisphere 166.9
1927 Female, age 91, both hemispheres 131.2
2531 Female, age 67, both hemispheres 130.0
2010 Male, age 76, both hemispheres 116.0
2528 Male, age 74, both hemispheres 115.1
2246 Female, age 85, both hemispheres 112.7
Entorhinal gyrus
nTPM: 156.2
2686 Male, age 75, right hemisphere 192.4
2117 Female, age 91, right hemisphere 173.3
2764 Male, age 80, right hemisphere 158.9
1938 Female, age 85, left hemisphere 140.8
1787 Male, age 76, left hemisphere 136.4
2613 Female, age 94, left hemisphere 135.4
Hippocampus, CA1
nTPM: 141.0
2749 Male, age 80, left hemisphere 186.8
2527 Male, age 74, both hemispheres 154.1
1873 Female, age 85, both hemispheres 137.5
2082 Female, age 91, right hemisphere 118.7
2045 Male, age 76, both hemispheres 108.0
Hippocampus, CA2
nTPM: 131.7
1963 Male, age 80, left hemisphere 191.2
2113 Female, age 91, right hemisphere 144.2
1892 Male, age 76, both hemispheres 131.8
2437 Female, age 94, left hemisphere 126.1
1940 Female, age 85, left hemisphere 103.0
2249 Male, age 74, both hemispheres 93.8
Hippocampus, CA3
nTPM: 123.6
2137 Male, age 80, left hemisphere 160.0
2861 Female, age 67, both hemispheres 138.3
1891 Female, age 85, both hemispheres 135.1
2620 Female, age 94, left hemisphere 108.5
1867 Male, age 76, both hemispheres 106.7
2436 Male, age 74, both hemispheres 93.0
Parahippocampal cortex
nTPM: 131.5
1850 Male, age 80, both hemispheres 168.4
2692 Male, age 74, both hemispheres 160.6
2245 Female, age 91, both hemispheres 156.5
2622 Female, age 67, right hemisphere 140.8
1990 Female, age 91, right hemisphere 136.8
1933 Female, age 85, both hemispheres 133.5
2018 Male, age 76, both hemispheres 133.3
2532 Female, age 72, left hemisphere 123.3
2250 Female, age 67, right hemisphere 83.2
2693 Female, age 94, both hemispheres 78.3
Perirhinal gyrus
nTPM: 143.6
1847 Female, age 91, left hemisphere 185.9
1794 Male, age 80, right hemisphere 168.4
1841 Female, age 85, right hemisphere 140.2
2848 Male, age 76, right hemisphere 136.9
2521 Female, age 94, right hemisphere 86.6
Subiculum
nTPM: 139.0
2438 Female, age 94, left hemisphere 166.5
2619 Male, age 74, both hemispheres 146.3
1901 Male, age 80, both hemispheres 146.1
2729 Female, age 91, right hemisphere 138.2
1977 Female, age 85, both hemispheres 137.5
2042 Male, age 76, both hemispheres 99.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 130.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 130.5
Samples: 197

Max nTPM: 317.2
Min nTPM: 33.0
Std nTPM: 51.2
Median nTPM: 126.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 317.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 266.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 262.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 254.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 253.6
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 251.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 243.9
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 240.9
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 239.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 234.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 230.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 814.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 814.8
FF:10169-103B7 60 years, female 815.1
FF:10153-102I9 76 years, female 814.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 294.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 283.4
Samples: 4

Max nTPM: 337.2
Min nTPM: 221.9
Sample A Female 337.2
Sample B Female 282.8
Sample C Male 291.5
Sample D Male 221.9
Entorhinal cortex
nTPM: 294.7
Samples: 4

Max nTPM: 319.2
Min nTPM: 267.8
Sample A Female 319.2
Sample B Female 287.1
Sample C Male 304.7
Sample D Male 267.8
Subiculum
nTPM: 266.9
Samples: 4

Max nTPM: 359.0
Min nTPM: 228.0
Sample A Female 359.0
Sample B Female 231.2
Sample C Male 249.3
Sample D Male 228.0
Ventral hippocampus
nTPM: 264.8
Samples: 4

Max nTPM: 328.9
Min nTPM: 203.5
Sample A Female 226.0
Sample B Female 203.5
Sample C Male 300.9
Sample D Male 328.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 238.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 238.1
Samples: 4

Max nTPM: 292.5
Min nTPM: 211.8
Sample A Male 226.2
Sample B Male 211.8
Sample C Female 222.0
Sample D Female 292.5
Hippocampal formation
nTPM: 199.4
Samples: 4

Max nTPM: 232.3
Min nTPM: 173.0
Sample A Male 178.3
Sample B Male 213.8
Sample C Female 232.3
Sample D Female 173.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.9
69885696 Antisense, RP_050512_03_C05, Mouse strain C57BL/6J (56 days, male) 6.9

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