HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:285.5 nTPM
HPA:285.5 nTPM
GTEx:333.1 nTPM
FANTOM5:126.0 Scaled Tags Per Million
Pig:188.5 nTPM
Mouse:273.6 nTPM
Allen mouse:16.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004190Antibody CAB005870
Glial cells HighLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 285.5
Sample id Sample description nTPM
Hippocampus
nTPM: 281.2
1898 Male, age 80, left hemisphere 295.1
2529 Female, age 94, left hemisphere 285.6
2148 Female, age 91, left hemisphere 278.4
1855 Male, age 76, left hemisphere 276.6
2621 Female, age 67, right hemisphere 276.6
1911 Female, age 85, right hemisphere 275.1
Dentate gyrus
nTPM: 277.0
1927 Female, age 91, both hemispheres 288.1
2010 Male, age 76, both hemispheres 282.1
2528 Male, age 74, both hemispheres 282.1
2246 Female, age 85, both hemispheres 279.7
2530 Female, age 94, left hemisphere 269.7
2531 Female, age 67, both hemispheres 260.6
Entorhinal gyrus
nTPM: 270.2
1938 Female, age 85, left hemisphere 281.5
2764 Male, age 80, right hemisphere 278.0
2117 Female, age 91, right hemisphere 275.1
1787 Male, age 76, left hemisphere 265.8
2686 Male, age 75, right hemisphere 263.9
2613 Female, age 94, left hemisphere 256.7
Hippocampus, CA1
nTPM: 285.5
2749 Male, age 80, left hemisphere 304.4
1873 Female, age 85, both hemispheres 289.4
2527 Male, age 74, both hemispheres 287.1
2045 Male, age 76, both hemispheres 274.0
2082 Female, age 91, right hemisphere 272.5
Hippocampus, CA2
nTPM: 283.0
2249 Male, age 74, both hemispheres 295.1
1892 Male, age 76, both hemispheres 294.3
1963 Male, age 80, left hemisphere 291.1
2113 Female, age 91, right hemisphere 278.0
1940 Female, age 85, left hemisphere 273.0
2437 Female, age 94, left hemisphere 266.7
Hippocampus, CA3
nTPM: 279.8
2436 Male, age 74, both hemispheres 309.0
2137 Male, age 80, left hemisphere 289.6
1867 Male, age 76, both hemispheres 284.5
1891 Female, age 85, both hemispheres 276.6
2620 Female, age 94, left hemisphere 261.1
2861 Female, age 67, both hemispheres 257.9
Parahippocampal cortex
nTPM: 276.0
1933 Female, age 85, both hemispheres 285.4
1850 Male, age 80, both hemispheres 284.9
2245 Female, age 91, both hemispheres 283.9
2250 Female, age 67, right hemisphere 283.7
1990 Female, age 91, right hemisphere 276.8
2532 Female, age 72, left hemisphere 276.7
2018 Male, age 76, both hemispheres 275.8
2692 Male, age 74, both hemispheres 266.6
2693 Female, age 94, both hemispheres 265.6
2622 Female, age 67, right hemisphere 261.1
Perirhinal gyrus
nTPM: 284.6
1847 Female, age 91, left hemisphere 300.4
1841 Female, age 85, right hemisphere 292.0
1794 Male, age 80, right hemisphere 283.7
2521 Female, age 94, right hemisphere 274.3
2848 Male, age 76, right hemisphere 272.8
Subiculum
nTPM: 274.8
1901 Male, age 80, both hemispheres 281.5
1977 Female, age 85, both hemispheres 279.0
2438 Female, age 94, left hemisphere 276.6
2729 Female, age 91, right hemisphere 273.6
2619 Male, age 74, both hemispheres 270.1
2042 Male, age 76, both hemispheres 267.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 333.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 333.1
Samples: 197

Max nTPM: 810.2
Min nTPM: 153.6
Std nTPM: 86.6
Median nTPM: 321.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 810.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 625.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 589.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 587.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 574.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 574.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 568.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 544.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 518.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 516.4
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 459.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 126.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 126.0
FF:10169-103B7 60 years, female 177.8
FF:10153-102I9 76 years, female 74.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 188.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 188.5
Samples: 4

Max nTPM: 262.9
Min nTPM: 143.3
Sample A Female 262.9
Sample B Female 165.5
Sample C Male 182.2
Sample D Male 143.3
Entorhinal cortex
nTPM: 142.2
Samples: 4

Max nTPM: 166.4
Min nTPM: 108.0
Sample A Female 166.4
Sample B Female 162.9
Sample C Male 131.3
Sample D Male 108.0
Subiculum
nTPM: 143.0
Samples: 4

Max nTPM: 188.8
Min nTPM: 124.6
Sample A Female 188.8
Sample B Female 128.6
Sample C Male 124.6
Sample D Male 129.9
Ventral hippocampus
nTPM: 161.6
Samples: 4

Max nTPM: 181.6
Min nTPM: 112.5
Sample A Female 176.0
Sample B Female 112.5
Sample C Male 181.6
Sample D Male 176.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 273.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 227.8
Samples: 4

Max nTPM: 247.0
Min nTPM: 211.2
Sample A Male 211.2
Sample B Male 225.3
Sample C Female 247.0
Sample D Female 227.7
Hippocampal formation
nTPM: 273.6
Samples: 4

Max nTPM: 283.2
Min nTPM: 259.1
Sample A Male 280.5
Sample B Male 259.1
Sample C Female 283.2
Sample D Female 271.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.2
513239 Antisense, RP_040810_01_D07, Mouse strain C57BL/6J (56 days, male) 17.9
112194293 Antisense, RP_110421_01_E04, Mouse strain C57BL/6J (56 days, male) 14.5

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