HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:39.4 nTPM
HPA:39.4 nTPM
GTEx:50.1 nTPM
FANTOM5:133.6 Scaled Tags Per Million
Pig:53.6 nTPM
Mouse:38.3 nTPM
Allen mouse:14.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008762
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.4
Sample id Sample description nTPM
Hippocampus
nTPM: 38.1
2621 Female, age 67, right hemisphere 40.2
2529 Female, age 94, left hemisphere 40.0
1911 Female, age 85, right hemisphere 38.3
2148 Female, age 91, left hemisphere 38.0
1855 Male, age 76, left hemisphere 36.2
1898 Male, age 80, left hemisphere 35.7
Dentate gyrus
nTPM: 38.5
2531 Female, age 67, both hemispheres 42.1
2530 Female, age 94, left hemisphere 39.3
2246 Female, age 85, both hemispheres 39.1
2010 Male, age 76, both hemispheres 38.8
2528 Male, age 74, both hemispheres 36.5
1927 Female, age 91, both hemispheres 35.5
Entorhinal gyrus
nTPM: 39.4
2686 Male, age 75, right hemisphere 41.9
2117 Female, age 91, right hemisphere 40.0
1938 Female, age 85, left hemisphere 39.5
2764 Male, age 80, right hemisphere 39.1
2613 Female, age 94, left hemisphere 38.3
1787 Male, age 76, left hemisphere 37.8
Hippocampus, CA1
nTPM: 38.5
2749 Male, age 80, left hemisphere 40.3
2527 Male, age 74, both hemispheres 39.1
1873 Female, age 85, both hemispheres 38.0
2082 Female, age 91, right hemisphere 37.7
2045 Male, age 76, both hemispheres 37.3
Hippocampus, CA2
nTPM: 36.6
2437 Female, age 94, left hemisphere 39.6
2113 Female, age 91, right hemisphere 37.7
1892 Male, age 76, both hemispheres 36.2
1940 Female, age 85, left hemisphere 36.2
1963 Male, age 80, left hemisphere 35.5
2249 Male, age 74, both hemispheres 34.2
Hippocampus, CA3
nTPM: 37.5
2861 Female, age 67, both hemispheres 41.7
2620 Female, age 94, left hemisphere 38.4
1891 Female, age 85, both hemispheres 37.6
2436 Male, age 74, both hemispheres 36.5
2137 Male, age 80, left hemisphere 36.4
1867 Male, age 76, both hemispheres 34.3
Parahippocampal cortex
nTPM: 38.7
2245 Female, age 91, both hemispheres 41.3
2532 Female, age 72, left hemisphere 41.1
2622 Female, age 67, right hemisphere 40.5
2692 Male, age 74, both hemispheres 39.4
2693 Female, age 94, both hemispheres 39.2
1850 Male, age 80, both hemispheres 38.9
1933 Female, age 85, both hemispheres 37.7
2250 Female, age 67, right hemisphere 36.5
1990 Female, age 91, right hemisphere 36.3
2018 Male, age 76, both hemispheres 36.2
Perirhinal gyrus
nTPM: 37.7
1841 Female, age 85, right hemisphere 38.9
1794 Male, age 80, right hemisphere 38.6
2848 Male, age 76, right hemisphere 38.4
2521 Female, age 94, right hemisphere 37.1
1847 Female, age 91, left hemisphere 35.6
Subiculum
nTPM: 38.6
2438 Female, age 94, left hemisphere 41.2
2042 Male, age 76, both hemispheres 40.4
1977 Female, age 85, both hemispheres 38.6
1901 Male, age 80, both hemispheres 38.3
2619 Male, age 74, both hemispheres 36.7
2729 Female, age 91, right hemisphere 36.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 50.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 50.1
Samples: 197

Max nTPM: 96.7
Min nTPM: 27.5
Std nTPM: 10.0
Median nTPM: 48.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 96.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 83.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 80.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 73.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 73.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 73.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 72.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 72.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 72.4
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 72.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 70.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 133.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 133.6
FF:10153-102I9 76 years, female 138.5
FF:10169-103B7 60 years, female 128.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 53.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 50.9
Samples: 4

Max nTPM: 56.6
Min nTPM: 46.8
Sample A Female 46.8
Sample B Female 48.0
Sample C Male 56.6
Sample D Male 52.3
Entorhinal cortex
nTPM: 53.7
Samples: 4

Max nTPM: 60.3
Min nTPM: 50.3
Sample A Female 53.6
Sample B Female 50.4
Sample C Male 50.3
Sample D Male 60.3
Subiculum
nTPM: 51.6
Samples: 4

Max nTPM: 53.1
Min nTPM: 50.0
Sample A Female 51.6
Sample B Female 51.7
Sample C Male 50.0
Sample D Male 53.1
Ventral hippocampus
nTPM: 46.8
Samples: 4

Max nTPM: 51.2
Min nTPM: 40.1
Sample A Female 51.0
Sample B Female 51.2
Sample C Male 40.1
Sample D Male 45.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.7
Samples: 4

Max nTPM: 35.5
Min nTPM: 29.0
Sample A Male 32.9
Sample B Male 35.5
Sample C Female 33.2
Sample D Female 29.0
Hippocampal formation
nTPM: 38.3
Samples: 4

Max nTPM: 44.0
Min nTPM: 31.1
Sample A Male 44.0
Sample B Male 41.7
Sample C Female 31.1
Sample D Female 36.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.5
69202818 Antisense, RP_050324_04_D10, Mouse strain C57BL/6J (56 days, male) 14.5

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