HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:54.8 nTPM
HPA:54.8 nTPM
GTEx:50.7 nTPM
FANTOM5:34.9 Scaled Tags Per Million
Pig:50.2 nTPM
Mouse:45.3 nTPM
Allen mouse:8.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028100Antibody HPA028134
Glial cells LowNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.8
Sample id Sample description nTPM
Hippocampus
nTPM: 53.2
1898 Male, age 80, left hemisphere 55.7
2621 Female, age 67, right hemisphere 54.9
2529 Female, age 94, left hemisphere 53.8
1855 Male, age 76, left hemisphere 52.5
2148 Female, age 91, left hemisphere 51.4
1911 Female, age 85, right hemisphere 50.8
Dentate gyrus
nTPM: 53.2
2530 Female, age 94, left hemisphere 54.8
1927 Female, age 91, both hemispheres 54.3
2246 Female, age 85, both hemispheres 53.2
2528 Male, age 74, both hemispheres 52.4
2010 Male, age 76, both hemispheres 52.2
2531 Female, age 67, both hemispheres 52.1
Entorhinal gyrus
nTPM: 52.7
2764 Male, age 80, right hemisphere 54.2
1787 Male, age 76, left hemisphere 53.9
1938 Female, age 85, left hemisphere 53.8
2686 Male, age 75, right hemisphere 52.0
2117 Female, age 91, right hemisphere 51.3
2613 Female, age 94, left hemisphere 50.8
Hippocampus, CA1
nTPM: 53.6
2749 Male, age 80, left hemisphere 58.0
2527 Male, age 74, both hemispheres 55.0
1873 Female, age 85, both hemispheres 53.0
2082 Female, age 91, right hemisphere 51.6
2045 Male, age 76, both hemispheres 50.4
Hippocampus, CA2
nTPM: 54.0
2249 Male, age 74, both hemispheres 56.4
1892 Male, age 76, both hemispheres 55.9
1963 Male, age 80, left hemisphere 54.8
2437 Female, age 94, left hemisphere 53.5
1940 Female, age 85, left hemisphere 52.2
2113 Female, age 91, right hemisphere 51.5
Hippocampus, CA3
nTPM: 53.8
2436 Male, age 74, both hemispheres 56.8
2137 Male, age 80, left hemisphere 55.6
1867 Male, age 76, both hemispheres 55.3
2620 Female, age 94, left hemisphere 52.9
1891 Female, age 85, both hemispheres 51.9
2861 Female, age 67, both hemispheres 50.0
Parahippocampal cortex
nTPM: 53.2
1850 Male, age 80, both hemispheres 55.9
2250 Female, age 67, right hemisphere 54.9
1990 Female, age 91, right hemisphere 54.2
1933 Female, age 85, both hemispheres 53.1
2693 Female, age 94, both hemispheres 52.9
2245 Female, age 91, both hemispheres 52.8
2692 Male, age 74, both hemispheres 52.5
2018 Male, age 76, both hemispheres 52.0
2532 Female, age 72, left hemisphere 51.8
2622 Female, age 67, right hemisphere 51.6
Perirhinal gyrus
nTPM: 54.8
1847 Female, age 91, left hemisphere 56.7
1841 Female, age 85, right hemisphere 55.5
1794 Male, age 80, right hemisphere 55.1
2521 Female, age 94, right hemisphere 54.3
2848 Male, age 76, right hemisphere 52.6
Subiculum
nTPM: 53.6
2438 Female, age 94, left hemisphere 57.1
1901 Male, age 80, both hemispheres 54.0
2619 Male, age 74, both hemispheres 54.0
1977 Female, age 85, both hemispheres 53.7
2042 Male, age 76, both hemispheres 51.6
2729 Female, age 91, right hemisphere 51.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 50.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 50.7
Samples: 197

Max nTPM: 136.1
Min nTPM: 27.6
Std nTPM: 13.9
Median nTPM: 48.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 136.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 107.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 87.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 87.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 85.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 84.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 84.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 75.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 74.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 74.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 73.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.9
FF:10169-103B7 60 years, female 36.6
FF:10153-102I9 76 years, female 33.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 50.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 50.2
Samples: 4

Max nTPM: 61.5
Min nTPM: 36.4
Sample A Female 61.5
Sample B Female 43.1
Sample C Male 59.7
Sample D Male 36.4
Entorhinal cortex
nTPM: 46.0
Samples: 4

Max nTPM: 51.5
Min nTPM: 38.7
Sample A Female 46.7
Sample B Female 47.0
Sample C Male 51.5
Sample D Male 38.7
Subiculum
nTPM: 48.6
Samples: 4

Max nTPM: 65.7
Min nTPM: 41.5
Sample A Female 65.7
Sample B Female 41.5
Sample C Male 42.8
Sample D Male 44.5
Ventral hippocampus
nTPM: 46.0
Samples: 4

Max nTPM: 55.0
Min nTPM: 35.9
Sample A Female 47.9
Sample B Female 35.9
Sample C Male 55.0
Sample D Male 45.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.0
Samples: 4

Max nTPM: 45.4
Min nTPM: 40.2
Sample A Male 40.2
Sample B Male 40.9
Sample C Female 45.4
Sample D Female 41.4
Hippocampal formation
nTPM: 45.3
Samples: 4

Max nTPM: 54.1
Min nTPM: 39.9
Sample A Male 54.1
Sample B Male 39.9
Sample C Female 44.0
Sample D Female 43.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.9
68545366 Antisense, RP_050118_03_C10, Mouse strain C57BL/6J (56 days, male) 8.9

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