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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:247.6 nTPM
HPA:247.6 nTPM
FANTOM5:409.3 Scaled Tags Per Million

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 247.6
Sample id Sample description nTPM
Area postrema
nTPM: 185.4
2799 Male, age 61, both hemispheres 208.0
2306 Male, age 80, both hemispheres 207.3
2054 Male, age 76, both hemispheres 140.8
Cuneate nuclei
nTPM: 170.3
2376 Male, age 61, both hemispheres 181.3
2131 Male, age 76, both hemispheres 171.2
2381 Male, age 80, both hemispheres 158.4
Dorsal medullary reticular nucleus
nTPM: 155.4
2040 Female, age 85, both hemispheres 188.5
2373 Male, age 61, both hemispheres 147.2
2088 Male, age 76, both hemispheres 130.6
Dorsal motor vagal complex
nTPM: 147.8
2000 Male, age 74, unknown 180.4
2844 Male, age 55, unknown 177.4
2133 Female, age 91, both hemispheres 171.8
2185 Male, age 76, both hemispheres 151.9
2797 Male, age 61, both hemispheres 133.5
2813 Female, age 72, unknown 128.8
2643 Male, age 74, both hemispheres 122.4
2807 Female, age 85, both hemispheres 116.3
Gigantocellular reticular nuclei, medullary
nTPM: 161.8
2462 Male, age 74, both hemispheres 217.4
2314 Male, age 61, both hemispheres 182.2
2310 Male, age 80, both hemispheres 165.7
1876 Female, age 85, both hemispheres 153.9
2387 Female, age 91, both hemispheres 133.3
2022 Male, age 76, right hemisphere 118.6
Gigantocellular reticular nuclei, pars
nTPM: 156.2
2168 Male, age 76, both hemispheres 171.1
2336 Male, age 61, both hemispheres 166.0
2084 Female, age 85, both hemispheres 163.0
2330 Male, age 80, both hemispheres 143.3
2706 Male, age 80, both hemispheres 137.6
Inferior olive
nTPM: 176.6
2563 Male, age 74, both hemispheres 204.9
2178 Male, age 61, both hemispheres 199.5
2085 Female, age 85, both hemispheres 173.5
2379 Male, age 80, both hemispheres 154.5
2628 Female, age 91, both hemispheres 150.5
Lateral medullary reticular nucleus
nTPM: 211.6
2305 Male, age 74, both hemispheres 343.2
2852 Male, age 80, both hemispheres 236.9
2044 Male, age 76, both hemispheres 189.9
2190 Female, age 85, both hemispheres 169.4
2374 Male, age 61, both hemispheres 167.7
2804 Female, age 91, both hemispheres 162.6
Medial vestibular nucleus
nTPM: 174.4
2134 Male, age 76, both hemispheres 204.0
2624 Male, age 61, both hemispheres 192.9
2801 Male, age 74, both hemispheres 187.8
2093 Male, age 80, both hemispheres 162.9
2803 Female, age 91, both hemispheres 152.7
2743 Female, age 85, both hemispheres 146.1
Motor hypoglossal nucleus
nTPM: 155.5
2182 Male, age 80, both hemispheres 181.8
2125 Female, age 91, both hemispheres 172.2
2132 Female, age 85, both hemispheres 154.3
2277 Male, age 76, both hemispheres 146.9
2461 Male, age 61, both hemispheres 122.5
Nucleus ambiguus
nTPM: 191.0
2071 Male, age 76, both hemispheres 191.5
2096 Female, age 85, both hemispheres 190.5
Nucleus cuneatus
nTPM: 162.9
2564 Male, age 74, both hemispheres 208.8
2380 Male, age 80, both hemispheres 197.2
2808 Female, age 85, both hemispheres 176.0
2100 Male, age 76, both hemispheres 162.1
2562 Male, age 61, both hemispheres 144.7
2805 Female, age 91, both hemispheres 88.2
Nucleus gracilis
nTPM: 190.2
2627 Male, age 74, both hemispheres 231.8
2382 Male, age 80, both hemispheres 175.5
2299 Female, age 85, both hemispheres 163.5
Nucleus raphe magnus
nTPM: 183.5
2051 Male, age 76, both hemispheres 250.9
2455 Male, age 74, both hemispheres 194.8
2172 Female, age 85, both hemispheres 186.2
2160 Male, age 61, both hemispheres 174.8
2328 Male, age 80, both hemispheres 148.0
2459 Female, age 91, both hemispheres 146.4
Nucleus raphe obscurus
nTPM: 184.0
2142 Male, age 76, midline 202.0
2800 Male, age 61, midline 183.6
2845 Female, age 85, midline 166.3
Nucleus raphe pallidus
nTPM: 247.6
1924 Male, age 61, midline 347.2
2183 Male, age 80, midline 206.2
2145 Male, age 76, midline 189.5
Nucleus tractus solitarii
nTPM: 132.9
2307 Male, age 80, both hemispheres 148.1
2656 Male, age 76, both hemispheres 137.7
2191 Female, age 85, both hemispheres 135.8
2144 Female, age 91, right hemisphere 109.9
Parvicellular reticular nuclei
nTPM: 171.3
2119 Male, age 80, both hemispheres 196.6
2095 Male, age 76, both hemispheres 162.3
2558 Male, age 74, both hemispheres 155.0
Parvicellular reticular nuclei, medullary
nTPM: 157.3
2091 Female, age 85, both hemispheres 167.7
2189 Female, age 91, both hemispheres 165.1
2181 Male, age 80, left hemisphere 139.1
Peritrigeminal nucleus
nTPM: 199.1
2067 Female, age 85, both hemispheres 227.4
2179 Male, age 61, both hemispheres 190.5
2136 Male, age 76, both hemispheres 179.5
Prepositus hypoglossal nucleus
nTPM: 155.7
2855 Female, age 85, right hemisphere 163.1
2086 Male, age 80, both hemispheres 148.2
Spinal trigeminal nucleus, caudal
nTPM: 168.9
2390 Female, age 91, both hemispheres 186.6
2447 Male, age 76, both hemispheres 177.7
2308 Male, age 80, both hemispheres 169.1
2312 Male, age 61, both hemispheres 164.7
2642 Male, age 74, both hemispheres 146.6
Spinal trigeminal nucleus, interpolar
nTPM: 177.7
2625 Male, age 61, both hemispheres 230.5
2066 Male, age 76, right hemisphere 195.3
2033 Male, age 80, both hemispheres 179.3
2386 Female, age 85, both hemispheres 145.7
2389 Female, age 91, both hemispheres 137.9
Spinal vestibular nucleus
nTPM: 154.6
2796 Male, age 61, both hemispheres 174.1
2780 Male, age 80, both hemispheres 167.7
2186 Female, age 91, both hemispheres 159.1
2748 Male, age 76, both hemispheres 154.5
2806 Female, age 85, both hemispheres 140.7
2384 Male, age 74, both hemispheres 131.4
Ventral medullary reticular nucleus
nTPM: 158.1
2372 Male, age 61, both hemispheres 164.7
2060 Male, age 76, both hemispheres 151.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 179.5
1986 Male, age 76, both hemispheres 187.7
2180 Male, age 61, both hemispheres 187.5
2118 Male, age 80, both hemispheres 180.4
2741 Female, age 85, both hemispheres 178.6
2302 Female, age 91, both hemispheres 163.3

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 409.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 409.3
FF:10174-103C3 60 years, female 434.0
FF:10155-103A2 76 years, female 418.4
FF:10038-101F2 18-64 years, mixed 375.3

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