HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:79.4 nTPM
HPA:79.4 nTPM
GTEx:98.8 nTPM
FANTOM5:103.4 Scaled Tags Per Million
Pig:43.6 nTPM
Mouse:30.2 nTPM
Allen mouse:3.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 79.4
Sample id Sample description nTPM
Hippocampus
nTPM: 74.1
1898 Male, age 80, left hemisphere 81.3
2621 Female, age 67, right hemisphere 76.3
2529 Female, age 94, left hemisphere 75.7
1855 Male, age 76, left hemisphere 75.2
1911 Female, age 85, right hemisphere 70.3
2148 Female, age 91, left hemisphere 65.6
Dentate gyrus
nTPM: 73.9
2010 Male, age 76, both hemispheres 94.0
2530 Female, age 94, left hemisphere 79.8
2531 Female, age 67, both hemispheres 75.8
2528 Male, age 74, both hemispheres 66.7
1927 Female, age 91, both hemispheres 66.2
2246 Female, age 85, both hemispheres 61.0
Entorhinal gyrus
nTPM: 67.9
2117 Female, age 91, right hemisphere 76.7
2686 Male, age 75, right hemisphere 71.2
1787 Male, age 76, left hemisphere 69.7
2764 Male, age 80, right hemisphere 65.2
2613 Female, age 94, left hemisphere 64.7
1938 Female, age 85, left hemisphere 60.0
Hippocampus, CA1
nTPM: 72.5
2045 Male, age 76, both hemispheres 108.2
1873 Female, age 85, both hemispheres 66.2
2749 Male, age 80, left hemisphere 65.0
2527 Male, age 74, both hemispheres 61.9
2082 Female, age 91, right hemisphere 61.0
Hippocampus, CA2
nTPM: 75.8
1892 Male, age 76, both hemispheres 86.6
1940 Female, age 85, left hemisphere 81.0
2437 Female, age 94, left hemisphere 79.2
2249 Male, age 74, both hemispheres 75.5
1963 Male, age 80, left hemisphere 70.0
2113 Female, age 91, right hemisphere 62.4
Hippocampus, CA3
nTPM: 79.4
1867 Male, age 76, both hemispheres 97.7
2436 Male, age 74, both hemispheres 89.9
2861 Female, age 67, both hemispheres 87.4
2137 Male, age 80, left hemisphere 72.0
2620 Female, age 94, left hemisphere 65.0
1891 Female, age 85, both hemispheres 64.6
Parahippocampal cortex
nTPM: 67.1
2018 Male, age 76, both hemispheres 85.8
1990 Female, age 91, right hemisphere 73.7
2622 Female, age 67, right hemisphere 71.7
2693 Female, age 94, both hemispheres 66.6
2245 Female, age 91, both hemispheres 66.2
2250 Female, age 67, right hemisphere 63.0
1850 Male, age 80, both hemispheres 62.6
2532 Female, age 72, left hemisphere 62.1
1933 Female, age 85, both hemispheres 60.2
2692 Male, age 74, both hemispheres 58.8
Perirhinal gyrus
nTPM: 70.1
2521 Female, age 94, right hemisphere 77.3
2848 Male, age 76, right hemisphere 75.4
1841 Female, age 85, right hemisphere 72.0
1794 Male, age 80, right hemisphere 64.4
1847 Female, age 91, left hemisphere 61.4
Subiculum
nTPM: 71.6
2042 Male, age 76, both hemispheres 91.6
1901 Male, age 80, both hemispheres 73.7
2729 Female, age 91, right hemisphere 69.2
2438 Female, age 94, left hemisphere 67.6
2619 Male, age 74, both hemispheres 64.4
1977 Female, age 85, both hemispheres 63.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 98.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 98.8
Samples: 197

Max nTPM: 330.2
Min nTPM: 16.5
Std nTPM: 63.3
Median nTPM: 79.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 330.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 325.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 322.7
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 272.3
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 251.1
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 238.5
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 235.2
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 234.2
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 233.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 232.7
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 230.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 103.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 103.4
FF:10153-102I9 76 years, female 138.8
FF:10169-103B7 60 years, female 68.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.5
Samples: 4

Max nTPM: 42.8
Min nTPM: 11.6
Sample A Female 23.7
Sample B Female 11.6
Sample C Male 42.8
Sample D Male 15.7
Entorhinal cortex
nTPM: 43.6
Samples: 4

Max nTPM: 58.3
Min nTPM: 29.7
Sample A Female 58.3
Sample B Female 29.7
Sample C Male 55.0
Sample D Male 31.4
Subiculum
nTPM: 36.1
Samples: 4

Max nTPM: 54.3
Min nTPM: 13.7
Sample A Female 38.4
Sample B Female 13.7
Sample C Male 54.3
Sample D Male 37.8
Ventral hippocampus
nTPM: 33.7
Samples: 4

Max nTPM: 70.2
Min nTPM: 16.6
Sample A Female 27.3
Sample B Female 16.6
Sample C Male 70.2
Sample D Male 20.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.2
Samples: 4

Max nTPM: 46.2
Min nTPM: 15.1
Sample A Male 35.1
Sample B Male 46.2
Sample C Female 15.1
Sample D Female 24.3
Hippocampal formation
nTPM: 13.3
Samples: 4

Max nTPM: 17.1
Min nTPM: 10.1
Sample A Male 17.1
Sample B Male 11.3
Sample C Female 10.1
Sample D Female 14.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.7
71608353 Antisense, RP_050927_01_E09, Mouse strain C57BL/6J (56 days, male) 4.6
324212 Antisense, RP_040617_01_E07, Mouse strain C57BL/6J (56 days, male) 2.8

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