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RPL21
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BRAIN PUTAMEN Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
PUTAMEN - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
HPA:1063.9 nTPM
GTEx:1111.0 nTPM
FANTOM5:31.6 Scaled Tags Per Million
Pig:35.3 nTPM

PUTAMEN - HPA Brain RNA-seq
Avg nTPM 1063.9
Sample id Sample description nTPM
Putamen
nTPM: 1063.9
2466 Female, age 79, unknown 1090.2
2647 Male, age 75, left hemisphere 1077.7
2482 Female, age 94, left hemisphere 1061.3
1838 Male, age 80, right hemisphere 1060.4
2489 Female, age 72, unknown 1059.6
1829 Male, age 74, unknown 1050.9
1937 Female, age 91, right hemisphere 1047.2

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1111.0
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 1111.0
Samples: 205

Max nTPM: 3392.4
Min nTPM: 517.2
Std nTPM: 402.9
Median nTPM: 1001.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 3392.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 2915.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 2378.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 2284.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 2284.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 2105.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 2008.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1959.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1877.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1866.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1743.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1735.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1730.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1726.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1688.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1687.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1674.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1659.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1659.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1655.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1654.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1635.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1615.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1594.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1590.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1559.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1551.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1523.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1516.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1507.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1506.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1491.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1490.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1483.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1481.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1462.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 1448.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1430.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1426.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1392.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1383.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1350.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1341.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1301.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1296.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 1295.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 1295.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1293.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 1270.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1266.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1264.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 1259.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1257.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1237.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1222.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 1217.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1214.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1209.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1203.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1198.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1184.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 1184.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1163.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 1160.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1159.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 1157.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1153.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1149.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 1144.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1135.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 1132.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1130.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1127.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1124.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 1116.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1114.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1100.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1088.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 1088.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 1086.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 1079.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 1077.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 1071.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1068.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 1067.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 1063.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 1047.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 1045.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 1045.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1045.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 1040.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 1036.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1035.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 1034.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1024.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 1023.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 1021.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 1020.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 1018.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1014.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1009.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1006.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 1001.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 994.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 993.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 992.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 989.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 988.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 988.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 987.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 985.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 984.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 981.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 980.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 974.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 974.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 972.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 970.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 966.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 964.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 963.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 962.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 962.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 959.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 958.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 957.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 956.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 954.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 951.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 951.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 944.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 944.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 941.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 939.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 938.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 926.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 925.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 923.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 908.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 906.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 906.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 905.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 905.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 904.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 896.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 891.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 888.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 888.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 888.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 878.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 877.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 874.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 870.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 868.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 855.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 844.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 843.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 843.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 842.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 838.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 830.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 817.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 812.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 811.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 807.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 804.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 803.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 798.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 797.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 790.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 782.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 781.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 780.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 780.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 779.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 775.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 769.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 765.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 763.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 756.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 755.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 748.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 744.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 736.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 733.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 726.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 720.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 712.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 707.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 690.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 689.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 686.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 680.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 664.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 661.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 651.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 639.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 619.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 602.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 588.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 572.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 570.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 567.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 524.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 517.2
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 31.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 31.6
FF:10176-103C5 60 years, female 31.6

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 35.3
Pig sample Sample description nTPM
Putamen
nTPM: 35.3
Samples: 4

Max nTPM: 41.3
Min nTPM: 29.8
Sample A Female 36.3
Sample B Female 29.8
Sample C Male 41.3
Sample D Male 33.9

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