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BRAIN THALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Thalamus
THALAMUS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:528.7 nTPM
HPA:528.7 nTPM
FANTOM5:543.8 Scaled Tags Per Million

THALAMUS - HPA Brain RNA-seq
Max nTPM 528.7
Sample id Sample description nTPM
Anterior thalamic nucleus, ventral
nTPM: 492.0
2396 Male, age 61, right hemisphere 507.3
2497 Male, age 66, unknown 488.4
2032 Female, age 42, unknown 480.4
Centromedial thalamic nucleus
nTPM: 491.6
2279 Female, age 85, left hemisphere 497.0
2401 Male, age 76, right hemisphere 486.2
Habenula
nTPM: 486.9
1957 Male, age 80, both hemispheres 499.5
2203 Male, age 61, left hemisphere 485.8
2252 Male, age 62, unknown 484.2
2276 Male, age 66, unknown 478.2
Lateral geniculate body
nTPM: 499.3
2575 Female, age 94, right hemisphere 529.6
2857 Male, age 74, right hemisphere 518.0
2841 Male, age 80, both hemispheres 503.2
2659 Male, age 66, unknown 497.1
1953 Male, age 62, unknown 494.7
2035 Female, age 72, unknown 488.2
2399 Male, age 61, left hemisphere 483.7
2106 Female, age 67, right hemisphere 479.8
Lateral thalamic nuclei
nTPM: 503.1
2573 Female, age 94, left hemisphere 524.8
2765 Female, age 67, both hemispheres 515.2
2661 Female, age 72, unknown 502.3
2577 Male, age 74, both hemispheres 498.9
1903 Male, age 76, left hemisphere 474.1
Medial dorsal thalamic nucleus
nTPM: 497.7
2572 Female, age 94, right hemisphere 569.3
1810 Male, age 48, unknown 501.1
2039 Female, age 72, unknown 501.1
1930 Female, age 42, unknown 498.3
2576 Male, age 74, both hemispheres 495.5
2492 Male, age 75, right hemisphere 494.8
2402 Female, age 67, both hemispheres 494.3
2026 Male, age 62, unknown 493.7
2660 Female, age 72, unknown 490.2
2498 Male, age 66, unknown 490.0
1859 Male, age 76, both hemispheres 483.5
1971 Male, age 61, right hemisphere 483.0
2283 Male, age 80, right hemisphere 475.8
Medial geniculate body
nTPM: 503.8
2571 Male, age 75, right hemisphere 530.0
2650 Female, age 94, left hemisphere 523.0
2657 Male, age 74, right hemisphere 502.7
2049 Male, age 76, both hemispheres 499.4
2207 Male, age 80, right hemisphere 496.1
1811 Female, age 42, unknown 491.8
2217 Female, age 72, unknown 483.4
Nucleus reuniens
nTPM: 507.7
2210 Female, age 85, left hemisphere 518.9
2205 Male, age 80, left hemisphere 503.0
2212 Female, age 67, left hemisphere 501.3
Nucleus rhomboideus
nTPM: 501.1
2213 Female, age 67, left hemisphere 516.3
2280 Female, age 85, left hemisphere 499.9
2206 Male, age 80, both hemispheres 487.0
Posterior thalamic nucleus
nTPM: 528.7
2649 Female, age 94, both hemispheres 630.7
2655 Male, age 74, right hemisphere 518.3
2495 Female, age 67, right hemisphere 488.9
2266 Male, age 76, right hemisphere 476.7
Pulvinar
nTPM: 489.4
2724 Male, age 74, right hemisphere 509.1
2499 Male, age 66, unknown 501.2
2496 Female, age 67, right hemisphere 499.2
1929 Male, age 48, unknown 489.3
1972 Male, age 62, unknown 489.0
1932 Male, age 80, right hemisphere 484.4
2582 Female, age 72, unknown 484.4
2214 Male, age 76, right hemisphere 483.5
2398 Male, age 61, left hemisphere 481.4
1899 Female, age 42, unknown 472.4
Subthalamic nucleus
nTPM: 497.7
2658 Male, age 74, both hemispheres 516.1
2124 Male, age 62, unknown 513.7
2275 Male, age 66, unknown 497.3
2779 Female, age 42, unknown 497.1
2056 Female, age 72, unknown 496.2
2282 Male, age 61, both hemispheres 491.6
2216 Male, age 48, unknown 489.0
2406 Female, age 72, unknown 480.7
Ventral posterolateral thalamic nucleus
nTPM: 486.3
2570 Male, age 75, right hemisphere 499.8
2578 Male, age 74, both hemispheres 495.8
2197 Male, age 80, both hemispheres 490.9
2397 Male, age 61, right hemisphere 480.7
2740 Male, age 76, right hemisphere 478.1
2581 Female, age 72, unknown 472.7
Ventral posteromedial thalamic nucleus
nTPM: 485.9
2281 Male, age 75, right hemisphere 499.5
2653 Male, age 74, both hemispheres 495.8
2127 Male, age 76, right hemisphere 484.2
2202 Male, age 61, left hemisphere 477.4
2758 Male, age 80, both hemispheres 472.6
Ventral thalamic nuclei
nTPM: 496.2
2580 Male, age 66, unknown 508.3
2291 Female, age 72, unknown 502.0
2652 Male, age 74, left hemisphere 499.7
1845 Male, age 48, unknown 498.5
1860 Male, age 76, both hemispheres 497.1
1912 Female, age 42, unknown 494.6
2285 Male, age 62, unknown 494.1
2204 Male, age 80, both hemispheres 488.4
2858 Female, age 72, unknown 483.0
Ventromedial nucleus
nTPM: 524.5
1982 Female, age 72, unknown 532.4
1822 Female, age 42, unknown 516.6
Zona incerta
nTPM: 499.8
2822 Male, age 74, right hemisphere 516.9
2403 Male, age 62, unknown 508.7
2215 Male, age 66, unknown 498.6
2663 Female, age 72, unknown 492.3
2208 Male, age 80, right hemisphere 482.3

THALAMUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 543.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Thalamus
Scaled Tags Per Million: 543.8
FF:10154-103A1 76 years, female 543.8

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