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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1274.2 nTPM
GTEx:1274.2 nTPM
FANTOM5:1918.8 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA043717
Squamous epithelial cells High


VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1274.2
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 1274.2
Samples: 156

Max nTPM: 2641.3
Min nTPM: 758.4
Std nTPM: 278.5
Median nTPM: 1242.5
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 2641.3
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 2583.3
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 1973.9
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 1901.7
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 1800.5
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 1730.6
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 1703.3
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 1687.3
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 1657.5
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 1639.6
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 1633.3
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 1619.6
GTEX-16NPV-2526-SM-6M483 50-59 years, female 1613.5
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 1605.4
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 1600.2
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 1595.0
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 1587.6
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 1584.3
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 1564.1
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 1556.4
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 1547.9
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 1546.9
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 1542.5
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 1541.6
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 1534.5
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 1531.5
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 1491.1
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 1489.0
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 1488.3
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 1487.1
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 1486.1
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 1482.0
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 1470.8
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 1470.4
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 1465.1
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 1464.2
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 1440.4
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 1437.3
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 1431.3
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 1430.3
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 1430.0
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 1413.5
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 1411.6
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 1407.4
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 1393.5
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 1386.8
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 1379.3
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 1376.2
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 1376.0
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 1372.6
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 1370.9
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 1364.5
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 1362.8
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 1361.0
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 1349.4
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 1345.8
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 1341.2
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 1338.1
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 1329.7
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 1309.7
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 1302.4
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 1301.1
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 1301.0
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 1294.3
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 1291.7
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 1290.0
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 1289.3
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 1276.6
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 1270.6
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 1267.1
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 1264.7
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 1262.1
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 1260.3
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 1258.6
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 1258.4
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 1251.4
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 1243.2
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 1243.0
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 1242.0
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 1236.7
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 1235.0
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 1230.2
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 1227.8
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 1225.5
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 1222.8
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 1220.7
GTEX-11I78-2026-SM-5987C 50-59 years, female 1215.8
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 1209.9
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 1209.2
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 1207.2
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 1193.6
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 1189.9
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 1189.3
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 1181.2
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 1176.0
GTEX-S341-1226-SM-4AD5S 40-49 years, female 1167.3
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 1157.7
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 1154.4
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 1153.7
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 1149.6
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 1144.0
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 1143.6
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 1140.3
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 1136.3
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 1130.7
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 1123.5
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 1120.2
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 1118.0
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 1116.9
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 1113.3
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 1110.4
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 1109.9
GTEX-14PKU-1326-SM-6871B 40-49 years, female 1107.6
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 1100.6
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 1100.0
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 1088.8
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 1086.1
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 1084.6
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 1084.1
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 1081.6
GTEX-1C475-0526-SM-793AC 40-49 years, female 1079.0
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 1057.3
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 1055.5
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 1055.1
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 1051.1
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 1048.2
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 1034.7
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 1024.6
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 1023.3
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 1020.8
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 1017.5
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 1010.6
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 1001.7
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 994.1
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 979.5
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 976.4
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 973.5
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 970.7
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 970.3
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 969.8
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 958.3
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 956.9
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 956.2
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 955.3
GTEX-QCQG-1226-SM-48U23 50-59 years, female 939.1
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 933.0
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 927.7
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 922.5
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 921.8
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 901.3
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 885.1
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 880.3
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 871.1
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 838.8
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 811.7
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 758.4
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1918.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 1918.8
FF:10204-103F6 68 years, female 1918.8

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