HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:2314.1 nTPM
HPA:2314.1 nTPM
GTEx:3286.0 nTPM
FANTOM5:1976.1 Scaled Tags Per Million
Pig:1874.6 nTPM
Mouse:2193.5 nTPM
Allen mouse:13.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004128
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 2314.1
Sample id Sample description nTPM
Hippocampus
nTPM: 1879.6
1911 Female, age 85, right hemisphere 2122.7
2621 Female, age 67, right hemisphere 2008.6
2529 Female, age 94, left hemisphere 1981.4
1898 Male, age 80, left hemisphere 1888.1
1855 Male, age 76, left hemisphere 1676.8
2148 Female, age 91, left hemisphere 1600.1
Dentate gyrus
nTPM: 1954.7
2530 Female, age 94, left hemisphere 3063.0
2010 Male, age 76, both hemispheres 1972.2
2528 Male, age 74, both hemispheres 1963.2
2531 Female, age 67, both hemispheres 1657.9
2246 Female, age 85, both hemispheres 1635.8
1927 Female, age 91, both hemispheres 1436.2
Entorhinal gyrus
nTPM: 1956.2
2117 Female, age 91, right hemisphere 3012.6
2764 Male, age 80, right hemisphere 2132.7
2686 Male, age 75, right hemisphere 1761.4
1938 Female, age 85, left hemisphere 1734.9
2613 Female, age 94, left hemisphere 1571.9
1787 Male, age 76, left hemisphere 1523.7
Hippocampus, CA1
nTPM: 1594.6
2527 Male, age 74, both hemispheres 1932.5
1873 Female, age 85, both hemispheres 1724.9
2082 Female, age 91, right hemisphere 1634.8
2749 Male, age 80, left hemisphere 1556.1
2045 Male, age 76, both hemispheres 1124.8
Hippocampus, CA2
nTPM: 1938.2
2249 Male, age 74, both hemispheres 2354.7
1963 Male, age 80, left hemisphere 2311.7
2437 Female, age 94, left hemisphere 1985.9
1940 Female, age 85, left hemisphere 1832.8
2113 Female, age 91, right hemisphere 1748.2
1892 Male, age 76, both hemispheres 1396.2
Hippocampus, CA3
nTPM: 1523.0
1891 Female, age 85, both hemispheres 2297.4
2436 Male, age 74, both hemispheres 1606.7
1867 Male, age 76, both hemispheres 1553.1
2137 Male, age 80, left hemisphere 1266.5
2620 Female, age 94, left hemisphere 1220.5
2861 Female, age 67, both hemispheres 1193.6
Parahippocampal cortex
nTPM: 1615.1
2532 Female, age 72, left hemisphere 2118.9
2692 Male, age 74, both hemispheres 1841.0
1990 Female, age 91, right hemisphere 1808.7
1850 Male, age 80, both hemispheres 1707.2
1933 Female, age 85, both hemispheres 1602.4
2018 Male, age 76, both hemispheres 1591.6
2245 Female, age 91, both hemispheres 1578.3
2250 Female, age 67, right hemisphere 1368.3
2693 Female, age 94, both hemispheres 1358.4
2622 Female, age 67, right hemisphere 1176.4
Perirhinal gyrus
nTPM: 1329.8
2521 Female, age 94, right hemisphere 1375.1
1794 Male, age 80, right hemisphere 1358.9
2848 Male, age 76, right hemisphere 1353.0
1847 Female, age 91, left hemisphere 1303.7
1841 Female, age 85, right hemisphere 1258.2
Subiculum
nTPM: 2314.1
2042 Male, age 76, both hemispheres 3028.4
1901 Male, age 80, both hemispheres 2711.5
1977 Female, age 85, both hemispheres 2221.7
2438 Female, age 94, left hemisphere 2104.3
2619 Male, age 74, both hemispheres 1951.6
2729 Female, age 91, right hemisphere 1867.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 3286.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3286.0
Samples: 197

Max nTPM: 9796.0
Min nTPM: 46.8
Std nTPM: 1957.5
Median nTPM: 2690.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 9796.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 9235.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 8457.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 8418.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 7900.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 7591.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 7586.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 7176.2
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 6930.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 6883.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 6859.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1976.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1976.1
FF:10153-102I9 76 years, female 2544.8
FF:10169-103B7 60 years, female 1407.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1874.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 1874.6
Samples: 4

Max nTPM: 3008.6
Min nTPM: 508.6
Sample A Female 3008.6
Sample B Female 1259.9
Sample C Male 2721.1
Sample D Male 508.6
Entorhinal cortex
nTPM: 475.7
Samples: 4

Max nTPM: 788.4
Min nTPM: 302.2
Sample A Female 304.9
Sample B Female 788.4
Sample C Male 302.2
Sample D Male 507.2
Subiculum
nTPM: 547.1
Samples: 4

Max nTPM: 690.0
Min nTPM: 369.2
Sample A Female 532.6
Sample B Female 690.0
Sample C Male 369.2
Sample D Male 596.7
Ventral hippocampus
nTPM: 1012.3
Samples: 4

Max nTPM: 1664.9
Min nTPM: 410.7
Sample A Female 1209.0
Sample B Female 410.7
Sample C Male 764.6
Sample D Male 1664.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2193.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1013.1
Samples: 4

Max nTPM: 1401.6
Min nTPM: 450.1
Sample A Male 1401.6
Sample B Male 1033.0
Sample C Female 1167.8
Sample D Female 450.1
Hippocampal formation
nTPM: 2193.5
Samples: 4

Max nTPM: 3404.7
Min nTPM: 1492.8
Sample A Male 1492.8
Sample B Male 1694.8
Sample C Female 3404.7
Sample D Female 2181.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.7
75496147 Antisense, RP_060523_03_G05, Mouse strain C57BL/6J (56 days, male) 15.9
75496510 Antisense, RP_060523_03_G05, Mouse strain C57BL/6J (56 days, male) 15.5
75457514 Antisense, RP_060523_03_G05, Mouse strain C57BL/6J (56 days, male) 15.5
75496148 Antisense, RP_060523_03_H05, Mouse strain C57BL/6J (56 days, male) 15.4
75496146 Antisense, RP_060523_03_F05, Mouse strain C57BL/6J (56 days, male) 14.6
69117382 Antisense, RP_050330_01_A05, Mouse strain C57BL/6J (56 days, male) 14.5
75496500 Antisense, RP_060523_03_F05, Mouse strain C57BL/6J (56 days, male) 14.4
75457513 Antisense, RP_060523_03_F05, Mouse strain C57BL/6J (56 days, male) 14.4
75496529 Antisense, RP_060523_03_H05, Mouse strain C57BL/6J (56 days, male) 14.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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