HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:94.7 nTPM
HPA:94.7 nTPM
GTEx:93.4 nTPM
FANTOM5:91.2 Scaled Tags Per Million
Mouse:42.0 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046784
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 94.7
Sample id Sample description nTPM
Hippocampus
nTPM: 84.1
1911 Female, age 85, right hemisphere 91.6
2529 Female, age 94, left hemisphere 89.3
2621 Female, age 67, right hemisphere 85.7
1898 Male, age 80, left hemisphere 84.8
2148 Female, age 91, left hemisphere 77.5
1855 Male, age 76, left hemisphere 75.4
Dentate gyrus
nTPM: 87.6
2530 Female, age 94, left hemisphere 126.8
2531 Female, age 67, both hemispheres 86.3
2010 Male, age 76, both hemispheres 84.3
2246 Female, age 85, both hemispheres 81.3
2528 Male, age 74, both hemispheres 76.2
1927 Female, age 91, both hemispheres 70.8
Entorhinal gyrus
nTPM: 93.8
2686 Male, age 75, right hemisphere 123.1
2117 Female, age 91, right hemisphere 97.4
2764 Male, age 80, right hemisphere 92.6
1938 Female, age 85, left hemisphere 87.5
2613 Female, age 94, left hemisphere 87.3
1787 Male, age 76, left hemisphere 74.9
Hippocampus, CA1
nTPM: 76.5
2082 Female, age 91, right hemisphere 83.7
1873 Female, age 85, both hemispheres 81.1
2527 Male, age 74, both hemispheres 78.1
2749 Male, age 80, left hemisphere 74.0
2045 Male, age 76, both hemispheres 65.4
Hippocampus, CA2
nTPM: 84.8
1963 Male, age 80, left hemisphere 100.7
2437 Female, age 94, left hemisphere 89.9
2113 Female, age 91, right hemisphere 82.2
1940 Female, age 85, left hemisphere 81.6
2249 Male, age 74, both hemispheres 81.2
1892 Male, age 76, both hemispheres 73.4
Hippocampus, CA3
nTPM: 76.2
1891 Female, age 85, both hemispheres 98.0
2861 Female, age 67, both hemispheres 79.7
1867 Male, age 76, both hemispheres 76.0
2137 Male, age 80, left hemisphere 68.7
2436 Male, age 74, both hemispheres 68.2
2620 Female, age 94, left hemisphere 66.4
Parahippocampal cortex
nTPM: 82.7
2692 Male, age 74, both hemispheres 101.2
2532 Female, age 72, left hemisphere 92.4
2622 Female, age 67, right hemisphere 87.6
1990 Female, age 91, right hemisphere 85.6
1850 Male, age 80, both hemispheres 82.4
1933 Female, age 85, both hemispheres 80.8
2245 Female, age 91, both hemispheres 79.4
2018 Male, age 76, both hemispheres 77.1
2693 Female, age 94, both hemispheres 72.1
2250 Female, age 67, right hemisphere 68.2
Perirhinal gyrus
nTPM: 71.0
2848 Male, age 76, right hemisphere 75.5
1841 Female, age 85, right hemisphere 71.4
1794 Male, age 80, right hemisphere 71.3
1847 Female, age 91, left hemisphere 71.0
2521 Female, age 94, right hemisphere 65.9
Subiculum
nTPM: 94.7
2042 Male, age 76, both hemispheres 104.9
1901 Male, age 80, both hemispheres 102.6
2438 Female, age 94, left hemisphere 101.4
1977 Female, age 85, both hemispheres 99.4
2619 Male, age 74, both hemispheres 81.4
2729 Female, age 91, right hemisphere 78.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 93.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 93.4
Samples: 197

Max nTPM: 405.6
Min nTPM: 8.9
Std nTPM: 67.4
Median nTPM: 77.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 405.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 384.0
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 353.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 342.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 303.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 258.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 249.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 245.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 236.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 217.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 215.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 91.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 91.2
FF:10169-103B7 60 years, female 92.0
FF:10153-102I9 76 years, female 90.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.0
Samples: 4

Max nTPM: 42.6
Min nTPM: 41.4
Sample A Male 41.4
Sample B Male 42.6
Sample C Female 41.6
Sample D Female 42.3
Hippocampal formation
nTPM: 38.2
Samples: 4

Max nTPM: 40.5
Min nTPM: 36.5
Sample A Male 40.5
Sample B Male 36.5
Sample C Female 38.3
Sample D Female 37.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
71612166 Antisense, RP_050927_02_C01, Mouse strain C57BL/6J (56 days, male) 3.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.