HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:59.7 nTPM
HPA:59.7 nTPM
GTEx:58.3 nTPM
FANTOM5:33.7 Scaled Tags Per Million
Pig:53.1 nTPM
Mouse:4.8 nTPM
Allen mouse:7.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045472
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.7
Sample id Sample description nTPM
Hippocampus
nTPM: 58.3
1898 Male, age 80, left hemisphere 60.4
2148 Female, age 91, left hemisphere 58.6
2529 Female, age 94, left hemisphere 58.3
2621 Female, age 67, right hemisphere 57.8
1855 Male, age 76, left hemisphere 57.3
1911 Female, age 85, right hemisphere 57.3
Dentate gyrus
nTPM: 58.9
2530 Female, age 94, left hemisphere 61.7
2531 Female, age 67, both hemispheres 60.3
2528 Male, age 74, both hemispheres 58.4
1927 Female, age 91, both hemispheres 58.2
2246 Female, age 85, both hemispheres 57.4
2010 Male, age 76, both hemispheres 57.2
Entorhinal gyrus
nTPM: 59.4
2764 Male, age 80, right hemisphere 61.3
1787 Male, age 76, left hemisphere 60.0
2117 Female, age 91, right hemisphere 59.3
1938 Female, age 85, left hemisphere 59.2
2613 Female, age 94, left hemisphere 58.7
2686 Male, age 75, right hemisphere 57.7
Hippocampus, CA1
nTPM: 58.1
2527 Male, age 74, both hemispheres 60.2
2749 Male, age 80, left hemisphere 58.4
1873 Female, age 85, both hemispheres 57.6
2045 Male, age 76, both hemispheres 57.4
2082 Female, age 91, right hemisphere 56.8
Hippocampus, CA2
nTPM: 58.0
2249 Male, age 74, both hemispheres 58.9
2437 Female, age 94, left hemisphere 58.6
2113 Female, age 91, right hemisphere 58.0
1892 Male, age 76, both hemispheres 57.9
1940 Female, age 85, left hemisphere 57.4
1963 Male, age 80, left hemisphere 57.3
Hippocampus, CA3
nTPM: 58.2
2620 Female, age 94, left hemisphere 62.4
2436 Male, age 74, both hemispheres 60.6
2861 Female, age 67, both hemispheres 57.3
1867 Male, age 76, both hemispheres 56.6
1891 Female, age 85, both hemispheres 56.2
2137 Male, age 80, left hemisphere 55.8
Parahippocampal cortex
nTPM: 58.8
1990 Female, age 91, right hemisphere 61.3
2532 Female, age 72, left hemisphere 60.7
2245 Female, age 91, both hemispheres 60.2
1850 Male, age 80, both hemispheres 59.4
2250 Female, age 67, right hemisphere 59.4
2622 Female, age 67, right hemisphere 58.9
1933 Female, age 85, both hemispheres 58.7
2693 Female, age 94, both hemispheres 57.7
2018 Male, age 76, both hemispheres 56.1
2692 Male, age 74, both hemispheres 56.0
Perirhinal gyrus
nTPM: 59.7
1794 Male, age 80, right hemisphere 63.2
1841 Female, age 85, right hemisphere 60.6
1847 Female, age 91, left hemisphere 59.8
2521 Female, age 94, right hemisphere 58.0
2848 Male, age 76, right hemisphere 57.1
Subiculum
nTPM: 57.5
1977 Female, age 85, both hemispheres 61.0
2619 Male, age 74, both hemispheres 59.1
1901 Male, age 80, both hemispheres 58.7
2729 Female, age 91, right hemisphere 56.5
2042 Male, age 76, both hemispheres 54.7
2438 Female, age 94, left hemisphere 54.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 58.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.3
Samples: 197

Max nTPM: 112.7
Min nTPM: 22.1
Std nTPM: 12.9
Median nTPM: 57.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 112.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 97.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 93.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 93.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 92.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 91.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 88.2
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 85.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 83.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 83.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 81.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.7
FF:10153-102I9 76 years, female 37.1
FF:10169-103B7 60 years, female 30.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 53.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 53.1
Samples: 4

Max nTPM: 66.4
Min nTPM: 38.2
Sample A Female 66.4
Sample B Female 50.9
Sample C Male 56.8
Sample D Male 38.2
Entorhinal cortex
nTPM: 47.6
Samples: 4

Max nTPM: 57.2
Min nTPM: 37.5
Sample A Female 43.2
Sample B Female 52.6
Sample C Male 57.2
Sample D Male 37.5
Subiculum
nTPM: 46.1
Samples: 4

Max nTPM: 63.9
Min nTPM: 36.5
Sample A Female 63.9
Sample B Female 43.0
Sample C Male 40.9
Sample D Male 36.5
Ventral hippocampus
nTPM: 48.9
Samples: 4

Max nTPM: 58.9
Min nTPM: 41.5
Sample A Female 42.4
Sample B Female 41.5
Sample C Male 58.9
Sample D Male 52.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.7
Samples: 4

Max nTPM: 4.9
Min nTPM: 4.5
Sample A Male 4.7
Sample B Male 4.9
Sample C Female 4.6
Sample D Female 4.5
Hippocampal formation
nTPM: 4.8
Samples: 4

Max nTPM: 5.1
Min nTPM: 4.4
Sample A Male 5.1
Sample B Male 5.0
Sample C Female 4.4
Sample D Female 4.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.8
69113841 Antisense, RP_050316_02_H06, Mouse strain C57BL/6J (56 days, male) 7.8

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