HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Mouse brain, Intensity
Hippocampal formationi 		73.816
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:88.5 nTPM
HPA:88.5 nTPM
GTEx:118.0 nTPM
FANTOM5:267.4 Scaled Tags Per Million
Mouse:37.1 nTPM
Allen mouse:14.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000798Antibody HPA052504
Glial cells HighNot detected
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA000798
Hippocampal formation mean intensity 73.816
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 32.554
Molecular layer of the dentate gyrus 5.929
Granular dentate gyrus 22.002
CA1 - oriens layer 9.081
CA1 - pyramidal layer 50.734
CA1 - radiatum layer 10.605
CA2 - oriens layer 19.526
CA2 - pyramidal layer 59.709
CA2 - radiatum layer 25.365
CA3 - oriens layer 11.152
CA3 - pyramidal layer 73.816
CA3 - radiatum layer 22.019
Stratum lucidum 27.451
Lacunosum moleculare 17.789
Subiculum 20.791

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 88.5
Sample id Sample description nTPM
Hippocampus
nTPM: 70.0
1911 Female, age 85, right hemisphere 87.4
2529 Female, age 94, left hemisphere 77.1
1898 Male, age 80, left hemisphere 67.4
2621 Female, age 67, right hemisphere 66.2
2148 Female, age 91, left hemisphere 62.5
1855 Male, age 76, left hemisphere 59.6
Dentate gyrus
nTPM: 69.1
2530 Female, age 94, left hemisphere 89.3
2528 Male, age 74, both hemispheres 84.3
2010 Male, age 76, both hemispheres 68.1
2246 Female, age 85, both hemispheres 67.0
2531 Female, age 67, both hemispheres 55.5
1927 Female, age 91, both hemispheres 50.5
Entorhinal gyrus
nTPM: 70.3
2117 Female, age 91, right hemisphere 105.5
2764 Male, age 80, right hemisphere 85.3
1938 Female, age 85, left hemisphere 68.5
1787 Male, age 76, left hemisphere 57.9
2686 Male, age 75, right hemisphere 53.3
2613 Female, age 94, left hemisphere 51.0
Hippocampus, CA1
nTPM: 64.3
2527 Male, age 74, both hemispheres 78.7
1873 Female, age 85, both hemispheres 72.7
2082 Female, age 91, right hemisphere 68.4
2749 Male, age 80, left hemisphere 55.3
2045 Male, age 76, both hemispheres 46.5
Hippocampus, CA2
nTPM: 75.4
2249 Male, age 74, both hemispheres 107.6
1963 Male, age 80, left hemisphere 82.7
1940 Female, age 85, left hemisphere 75.8
2113 Female, age 91, right hemisphere 69.2
2437 Female, age 94, left hemisphere 67.7
1892 Male, age 76, both hemispheres 49.5
Hippocampus, CA3
nTPM: 61.4
1891 Female, age 85, both hemispheres 95.2
2436 Male, age 74, both hemispheres 81.0
1867 Male, age 76, both hemispheres 55.5
2620 Female, age 94, left hemisphere 50.1
2137 Male, age 80, left hemisphere 46.8
2861 Female, age 67, both hemispheres 40.0
Parahippocampal cortex
nTPM: 60.6
2532 Female, age 72, left hemisphere 79.3
1990 Female, age 91, right hemisphere 72.6
2692 Male, age 74, both hemispheres 71.3
2245 Female, age 91, both hemispheres 65.3
1933 Female, age 85, both hemispheres 62.9
1850 Male, age 80, both hemispheres 59.5
2018 Male, age 76, both hemispheres 56.7
2250 Female, age 67, right hemisphere 50.3
2693 Female, age 94, both hemispheres 46.8
2622 Female, age 67, right hemisphere 41.2
Perirhinal gyrus
nTPM: 48.2
2521 Female, age 94, right hemisphere 52.9
1794 Male, age 80, right hemisphere 50.3
2848 Male, age 76, right hemisphere 48.0
1847 Female, age 91, left hemisphere 45.1
1841 Female, age 85, right hemisphere 44.8
Subiculum
nTPM: 88.5
2042 Male, age 76, both hemispheres 104.3
1901 Male, age 80, both hemispheres 101.7
1977 Female, age 85, both hemispheres 95.9
2438 Female, age 94, left hemisphere 83.0
2619 Male, age 74, both hemispheres 76.5
2729 Female, age 91, right hemisphere 69.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 118.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 118.0
Samples: 197

Max nTPM: 400.3
Min nTPM: 17.0
Std nTPM: 74.2
Median nTPM: 98.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 400.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 377.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 363.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 361.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 340.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 328.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 311.7
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 308.4
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 293.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 260.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 257.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 267.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 267.4
FF:10153-102I9 76 years, female 365.4
FF:10169-103B7 60 years, female 169.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.2
Samples: 4

Max nTPM: 30.5
Min nTPM: 24.4
Sample A Male 24.4
Sample B Male 24.4
Sample C Female 25.4
Sample D Female 30.5
Hippocampal formation
nTPM: 37.1
Samples: 4

Max nTPM: 41.9
Min nTPM: 34.0
Sample A Male 34.0
Sample B Male 41.9
Sample C Female 36.9
Sample D Female 35.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.2
532642 Antisense, RP_040810_02_H07, Mouse strain C57BL/6J (56 days, male) 14.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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