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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 777.5
Min nTPM: 293.6
Std nTPM: 102.9
Median nTPM:
237_1
82 years, male
777.5
495_1
57 years, female
768.6
394_1
75 years, female
703.7
389_1
86 years, female
692.9
375_1
74 years, female
675.7
503_1
68 years, male
669.4
384_1
83 years, male
667.4
499_1
55 years, female
657.0
42_1
85 years, male
652.0
466_1
57 years, female
640.1
126_1
63 years, male
634.5
335_1
73 years, female
633.7
313_1
79 years, female
629.2
218_1
71 years, female
621.3
163_1
78 years, male
620.3
308_1
70 years, female
615.1
266_1
85 years, male
614.6
246_1
77 years, male
612.9
189_1
76 years, male
592.9
377_1
82 years, female
588.6
518_1
75 years, female
583.8
229_1
69 years, female
580.5
347_1
72 years, male
578.5
406_1
79 years, male
578.4
414_1
84 years, female
578.3
526_1
61 years, male
577.1
321_1
62 years, female
576.6
293_1
68 years, female
570.4
355_1
70 years, female
568.8
517_1
88 years, male
567.7
376_1
75 years, female
565.9
468_1
89 years, male
565.7
251_1
78 years, male
553.2
396_1
62 years, male
552.7
307_1
66 years, female
548.4
35_1
74 years, female
548.3
265_1
87 years, male
547.1
404_1
82 years, female
545.6
379_1
60 years, male
544.9
217_1
76 years, male
538.2
425_1
59 years, female
534.8
386_1
76 years, male
532.6
117_1
61 years, male
524.5
405_1
91 years, male
512.2
292_1
71 years, male
502.9
137_1
83 years, male
491.3
18_1
88 years, male
490.8
177_1
74 years, male
489.1
317_1
60 years, male
486.3
162_1
79 years, female
482.2
4_1
88 years, female
481.4
447_1
81 years, male
478.0
153_1
70 years, female
477.7
286_1
68 years, female
473.2
356_1
87 years, female
471.7
413_1
59 years, female
471.6
6_1
73 years, female
470.2
2_1
77 years, female
468.0
9_1
66 years, female
466.8
17_1
71 years, male
466.7
480_1
63 years, male
463.6
319_1
81 years, male
458.1
243_1
75 years, male
457.4
41_1
94 years, female
452.5
120_1
70 years, female
444.6
173_1
67 years, male
443.9
254_1
77 years, female
440.1
291_1
76 years, male
436.5
350_1
84 years, female
435.7
145_1
84 years, male
435.2
315_1
62 years, female
434.9
324_1
76 years, male
434.9
415_1
77 years, female
432.2
99_1
64 years, male
430.6
352_1
62 years, male
430.4
288_1
66 years, female
427.1
149_1
88 years, male
426.9
142_1
61 years, female
422.0
316_1
62 years, male
422.0
115_1
83 years, male
421.1
349_1
83 years, male
417.9
264_1
73 years, female
410.9
81_1
67 years, male
409.9
318_1
68 years, male
406.2
354_1
81 years, female
405.9
172_1
72 years, female
403.2
295_1
61 years, female
403.2
322_1
76 years, male
402.2
348_1
84 years, male
399.6
501_1
88 years, male
390.3
32_1
67 years, male
384.3
490_1
67 years, female
382.3
89_1
63 years, male
377.1
139_1
64 years, female
373.8
353_1
82 years, female
369.2
119_1
70 years, female
368.3
311_1
78 years, male
362.3
452_1
88 years, female
359.3
320_1
89 years, female
358.1
491_1
89 years, female
357.4
109_1
81 years, female
355.8
43_1
64 years, female
347.8
351_1
91 years, male
330.1
314_1
67 years, male
306.9
506_1
65 years, male
293.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.