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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA010698
Pigment epithelial cells
Not detected
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Low
Inner nuclear layer
High
Inner plexiform layer
Low
Ganglion cells
Not detected
Nerve fiber layer
Low
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 957.0
Min nTPM: 315.7
Std nTPM: 151.0
Median nTPM: 0.0
349_1
83 years, male
957.0
375_1
74 years, female
923.3
243_1
75 years, male
897.5
319_1
81 years, male
890.2
386_1
76 years, male
875.6
172_1
72 years, female
870.2
347_1
72 years, male
860.6
425_1
59 years, female
847.0
335_1
73 years, female
825.3
177_1
74 years, male
822.2
350_1
84 years, female
820.7
229_1
69 years, female
810.2
355_1
70 years, female
806.6
447_1
81 years, male
797.9
389_1
86 years, female
795.2
266_1
85 years, male
794.0
379_1
60 years, male
793.8
376_1
75 years, female
787.9
163_1
78 years, male
783.7
352_1
62 years, male
753.7
246_1
77 years, male
740.9
317_1
60 years, male
739.7
377_1
82 years, female
735.4
321_1
62 years, female
726.6
237_1
82 years, male
725.4
218_1
71 years, female
724.6
526_1
61 years, male
721.3
307_1
66 years, female
712.4
468_1
89 years, male
712.0
394_1
75 years, female
709.0
351_1
91 years, male
700.6
354_1
81 years, female
695.0
452_1
88 years, female
683.5
292_1
71 years, male
683.2
265_1
87 years, male
677.4
173_1
67 years, male
675.2
286_1
68 years, female
674.5
353_1
82 years, female
673.6
311_1
78 years, male
671.7
254_1
77 years, female
671.6
324_1
76 years, male
667.5
291_1
76 years, male
666.5
6_1
73 years, female
656.1
318_1
68 years, male
652.0
189_1
76 years, male
648.2
406_1
79 years, male
646.8
293_1
68 years, female
641.7
356_1
87 years, female
640.6
396_1
62 years, male
637.0
405_1
91 years, male
636.7
503_1
68 years, male
633.5
41_1
94 years, female
621.7
348_1
84 years, male
617.4
414_1
84 years, female
617.0
99_1
64 years, male
616.7
315_1
62 years, female
611.3
384_1
83 years, male
607.3
404_1
82 years, female
605.7
316_1
62 years, male
597.6
415_1
77 years, female
596.6
322_1
76 years, male
581.4
115_1
83 years, male
577.1
251_1
78 years, male
567.3
264_1
73 years, female
566.9
109_1
81 years, female
566.5
313_1
79 years, female
561.8
117_1
61 years, male
553.0
499_1
55 years, female
551.7
126_1
63 years, male
549.1
320_1
89 years, female
545.5
120_1
70 years, female
541.9
480_1
63 years, male
537.1
153_1
70 years, female
531.0
517_1
88 years, male
528.3
217_1
76 years, male
522.8
506_1
65 years, male
509.2
314_1
67 years, male
503.3
137_1
83 years, male
497.7
35_1
74 years, female
492.8
18_1
88 years, male
490.4
308_1
70 years, female
482.9
9_1
66 years, female
482.8
142_1
61 years, female
479.0
518_1
75 years, female
475.1
295_1
61 years, female
473.9
42_1
85 years, male
463.0
145_1
84 years, male
462.1
288_1
66 years, female
459.0
32_1
67 years, male
451.8
4_1
88 years, female
451.2
162_1
79 years, female
432.7
466_1
57 years, female
420.2
17_1
71 years, male
419.7
119_1
70 years, female
410.0
2_1
77 years, female
401.1
43_1
64 years, female
400.5
81_1
67 years, male
395.7
490_1
67 years, female
393.6
413_1
59 years, female
371.9
139_1
64 years, female
366.4
89_1
63 years, male
359.8
495_1
57 years, female
358.5
491_1
89 years, female
344.7
501_1
88 years, male
321.5
149_1
88 years, male
315.7
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.