HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:71.8 nTPM
HPA:71.8 nTPM
GTEx:140.8 nTPM
FANTOM5:889.4 Scaled Tags Per Million
Pig:212.9 nTPM
Mouse:323.4 nTPM
Allen mouse:13.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 71.8
Sample id Sample description nTPM
Hippocampus
nTPM: 21.4
2621 Female, age 67, right hemisphere 53.7
1855 Male, age 76, left hemisphere 30.6
2529 Female, age 94, left hemisphere 27.8
1898 Male, age 80, left hemisphere 16.5
1911 Female, age 85, right hemisphere 0.0
2148 Female, age 91, left hemisphere 0.0
Dentate gyrus
nTPM: 27.6
2530 Female, age 94, left hemisphere 121.0
2010 Male, age 76, both hemispheres 27.0
2246 Female, age 85, both hemispheres 9.6
2531 Female, age 67, both hemispheres 8.0
1927 Female, age 91, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
Entorhinal gyrus
nTPM: 66.1
2613 Female, age 94, left hemisphere 129.6
2764 Male, age 80, right hemisphere 104.1
2686 Male, age 75, right hemisphere 58.3
1787 Male, age 76, left hemisphere 52.3
1938 Female, age 85, left hemisphere 52.2
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 36.1
2749 Male, age 80, left hemisphere 152.9
2527 Male, age 74, both hemispheres 16.9
1873 Female, age 85, both hemispheres 9.7
2045 Male, age 76, both hemispheres 0.9
2082 Female, age 91, right hemisphere 0.0
Hippocampus, CA2
nTPM: 25.1
2437 Female, age 94, left hemisphere 62.6
1892 Male, age 76, both hemispheres 48.5
1963 Male, age 80, left hemisphere 39.7
1940 Female, age 85, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 28.2
2861 Female, age 67, both hemispheres 65.4
2137 Male, age 80, left hemisphere 55.1
2620 Female, age 94, left hemisphere 42.4
1867 Male, age 76, both hemispheres 6.3
1891 Female, age 85, both hemispheres 0.0
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 50.6
2622 Female, age 67, right hemisphere 110.0
2532 Female, age 72, left hemisphere 77.3
2245 Female, age 91, both hemispheres 77.2
1850 Male, age 80, both hemispheres 72.0
2692 Male, age 74, both hemispheres 48.2
2693 Female, age 94, both hemispheres 43.4
1933 Female, age 85, both hemispheres 28.6
1990 Female, age 91, right hemisphere 27.9
2018 Male, age 76, both hemispheres 21.5
2250 Female, age 67, right hemisphere 0.0
Perirhinal gyrus
nTPM: 71.8
1794 Male, age 80, right hemisphere 102.8
1847 Female, age 91, left hemisphere 83.2
1841 Female, age 85, right hemisphere 68.4
2521 Female, age 94, right hemisphere 57.5
2848 Male, age 76, right hemisphere 47.2
Subiculum
nTPM: 28.5
2438 Female, age 94, left hemisphere 88.2
1977 Female, age 85, both hemispheres 37.9
2619 Male, age 74, both hemispheres 30.6
1901 Male, age 80, both hemispheres 14.6
2042 Male, age 76, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 140.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 140.8
Samples: 197

Max nTPM: 332.7
Min nTPM: 29.0
Std nTPM: 52.8
Median nTPM: 133.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 332.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 314.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 290.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 269.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 258.4
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 255.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 246.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 245.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 245.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 239.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 238.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 889.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 889.4
FF:10169-103B7 60 years, female 1000.3
FF:10153-102I9 76 years, female 778.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 212.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 180.6
Samples: 4

Max nTPM: 230.6
Min nTPM: 121.8
Sample A Female 230.6
Sample B Female 180.6
Sample C Male 189.4
Sample D Male 121.8
Entorhinal cortex
nTPM: 209.5
Samples: 4

Max nTPM: 226.1
Min nTPM: 188.0
Sample A Female 226.1
Sample B Female 188.0
Sample C Male 216.7
Sample D Male 207.0
Subiculum
nTPM: 212.9
Samples: 4

Max nTPM: 297.5
Min nTPM: 161.7
Sample A Female 297.5
Sample B Female 187.7
Sample C Male 204.7
Sample D Male 161.7
Ventral hippocampus
nTPM: 195.4
Samples: 4

Max nTPM: 257.8
Min nTPM: 135.4
Sample A Female 182.6
Sample B Female 135.4
Sample C Male 257.8
Sample D Male 205.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 323.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 323.4
Samples: 4

Max nTPM: 396.7
Min nTPM: 288.5
Sample A Male 318.2
Sample B Male 290.3
Sample C Female 288.5
Sample D Female 396.7
Hippocampal formation
nTPM: 234.2
Samples: 4

Max nTPM: 245.4
Min nTPM: 223.0
Sample A Male 223.3
Sample B Male 245.4
Sample C Female 245.1
Sample D Female 223.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.4
69735759 Antisense, RP_050503_03_E02, Mouse strain C57BL/6J (56 days, male) 18.4
74513872 Antisense, RP_060208_01_E12, Mouse strain C57BL/6J (56 days, male) 8.3

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The Human Protein Atlas

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