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ATP5IF1
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  • ATP5IF1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:318.1 nTPM
FANTOM5:537.6 Scaled Tags Per Million
Pig:165.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA027999
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 318.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 318.1
Samples: 246

Max nTPM: 853.1
Min nTPM: 110.7
Std nTPM: 123.6
Median nTPM: 307.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 853.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 749.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 719.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 710.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 692.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 690.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 644.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 608.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 601.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 583.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 555.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 551.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 530.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 515.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 507.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 506.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 498.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 495.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 490.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 483.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 482.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 481.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 475.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 474.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 468.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 463.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 462.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 461.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 457.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 455.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 455.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 455.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 448.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 445.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 442.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 432.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 430.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 430.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 429.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 425.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 411.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 410.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 409.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 408.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 407.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 404.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 403.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 402.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 401.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 400.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 400.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 400.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 398.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 393.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 388.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 387.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 385.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 383.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 381.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 380.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 379.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 376.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 374.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 374.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 373.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 370.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 370.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 369.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 369.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 368.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 364.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 364.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 362.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 361.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 361.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 357.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 357.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 356.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 355.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 355.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 354.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 354.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 354.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 352.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 351.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 351.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 348.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 348.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 346.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 341.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 341.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 341.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 341.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 340.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 337.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 335.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 334.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 333.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 332.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 332.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 329.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 328.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 325.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 323.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 321.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 321.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 319.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 319.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 319.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 318.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 318.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 317.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 316.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 315.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 313.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 312.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 311.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 310.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 310.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 309.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 308.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 308.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 308.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 306.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 305.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 304.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 302.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 302.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 301.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 299.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 297.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 297.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 296.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 296.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 295.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 295.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 295.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 295.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 292.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 292.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 292.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 290.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 289.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 288.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 288.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 285.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 284.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 283.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 280.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 280.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 277.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 274.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 273.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 271.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 270.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 269.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 269.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 269.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 268.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 266.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 265.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 264.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 263.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 257.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 257.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 254.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 254.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 253.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 251.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 251.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 250.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 249.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 249.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 247.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 244.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 243.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 242.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 235.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 235.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 233.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 231.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 230.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 230.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 230.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 230.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 229.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 228.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 227.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 224.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 222.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 221.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 219.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 217.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 217.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 214.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 214.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 212.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 210.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 209.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 204.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 202.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 200.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 200.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 194.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 194.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 193.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 191.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 189.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 186.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 185.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 185.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 183.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 183.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 182.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 181.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 180.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 177.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 177.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 175.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 170.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 169.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 168.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 167.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 166.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 165.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 164.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 164.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 162.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 161.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 160.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 158.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 157.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 155.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 151.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 150.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 147.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 146.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 144.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 143.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 141.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 137.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 135.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 134.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 129.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 124.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 110.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 537.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 537.6
FF:10164-103B2 76 years, female 537.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 165.6
Pig sample Sample description nTPM
Caudate
nTPM: 165.6
Samples: 4

Max nTPM: 191.2
Min nTPM: 151.9
Sample A Female 157.3
Sample B Female 162.1
Sample C Male 191.2
Sample D Male 151.9

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