HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:88.1 nTPM
HPA:88.1 nTPM
GTEx:96.4 nTPM
FANTOM5:103.2 Scaled Tags Per Million
Pig:93.0 nTPM
Mouse:98.5 nTPM
Allen mouse:16.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041997
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 88.1
Sample id Sample description nTPM
Hippocampus
nTPM: 88.1
1898 Male, age 80, left hemisphere 91.3
2529 Female, age 94, left hemisphere 90.0
2621 Female, age 67, right hemisphere 89.6
2148 Female, age 91, left hemisphere 86.7
1855 Male, age 76, left hemisphere 86.0
1911 Female, age 85, right hemisphere 84.9
Dentate gyrus
nTPM: 87.7
2530 Female, age 94, left hemisphere 95.0
2531 Female, age 67, both hemispheres 88.8
2010 Male, age 76, both hemispheres 87.8
2246 Female, age 85, both hemispheres 85.8
2528 Male, age 74, both hemispheres 85.1
1927 Female, age 91, both hemispheres 83.8
Entorhinal gyrus
nTPM: 87.4
2117 Female, age 91, right hemisphere 91.2
1787 Male, age 76, left hemisphere 88.8
1938 Female, age 85, left hemisphere 86.9
2764 Male, age 80, right hemisphere 86.9
2686 Male, age 75, right hemisphere 85.4
2613 Female, age 94, left hemisphere 85.3
Hippocampus, CA1
nTPM: 86.0
2749 Male, age 80, left hemisphere 90.5
2527 Male, age 74, both hemispheres 85.7
1873 Female, age 85, both hemispheres 85.3
2045 Male, age 76, both hemispheres 84.5
2082 Female, age 91, right hemisphere 84.2
Hippocampus, CA2
nTPM: 86.6
1963 Male, age 80, left hemisphere 90.5
2437 Female, age 94, left hemisphere 87.7
2249 Male, age 74, both hemispheres 85.8
1940 Female, age 85, left hemisphere 85.4
2113 Female, age 91, right hemisphere 85.4
1892 Male, age 76, both hemispheres 84.9
Hippocampus, CA3
nTPM: 85.1
2861 Female, age 67, both hemispheres 86.9
1867 Male, age 76, both hemispheres 86.8
2137 Male, age 80, left hemisphere 84.7
2436 Male, age 74, both hemispheres 84.6
1891 Female, age 85, both hemispheres 83.8
2620 Female, age 94, left hemisphere 83.8
Parahippocampal cortex
nTPM: 84.2
2532 Female, age 72, left hemisphere 89.2
2245 Female, age 91, both hemispheres 88.4
2018 Male, age 76, both hemispheres 86.9
1990 Female, age 91, right hemisphere 85.0
1933 Female, age 85, both hemispheres 83.7
2250 Female, age 67, right hemisphere 83.7
1850 Male, age 80, both hemispheres 83.0
2692 Male, age 74, both hemispheres 82.9
2622 Female, age 67, right hemisphere 81.1
2693 Female, age 94, both hemispheres 78.0
Perirhinal gyrus
nTPM: 84.2
1794 Male, age 80, right hemisphere 88.1
1847 Female, age 91, left hemisphere 84.9
2521 Female, age 94, right hemisphere 84.0
1841 Female, age 85, right hemisphere 83.8
2848 Male, age 76, right hemisphere 80.3
Subiculum
nTPM: 86.5
1901 Male, age 80, both hemispheres 89.3
2042 Male, age 76, both hemispheres 87.8
1977 Female, age 85, both hemispheres 87.0
2438 Female, age 94, left hemisphere 87.0
2619 Male, age 74, both hemispheres 85.0
2729 Female, age 91, right hemisphere 82.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 96.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 96.4
Samples: 197

Max nTPM: 162.5
Min nTPM: 56.9
Std nTPM: 19.4
Median nTPM: 92.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 162.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 159.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 153.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 153.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 149.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 147.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 145.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 140.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 139.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 136.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 135.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 103.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 103.2
FF:10169-103B7 60 years, female 107.7
FF:10153-102I9 76 years, female 98.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 93.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 93.0
Samples: 4

Max nTPM: 123.2
Min nTPM: 66.8
Sample A Female 123.2
Sample B Female 84.7
Sample C Male 97.4
Sample D Male 66.8
Entorhinal cortex
nTPM: 70.1
Samples: 4

Max nTPM: 79.4
Min nTPM: 54.1
Sample A Female 73.7
Sample B Female 79.4
Sample C Male 73.1
Sample D Male 54.1
Subiculum
nTPM: 74.2
Samples: 4

Max nTPM: 99.5
Min nTPM: 63.7
Sample A Female 99.5
Sample B Female 67.3
Sample C Male 63.7
Sample D Male 66.2
Ventral hippocampus
nTPM: 80.5
Samples: 4

Max nTPM: 96.8
Min nTPM: 58.0
Sample A Female 81.8
Sample B Female 58.0
Sample C Male 96.8
Sample D Male 85.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 98.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 95.6
Samples: 4

Max nTPM: 100.5
Min nTPM: 93.2
Sample A Male 93.9
Sample B Male 94.6
Sample C Female 100.5
Sample D Female 93.2
Hippocampal formation
nTPM: 98.5
Samples: 4

Max nTPM: 103.6
Min nTPM: 93.1
Sample A Male 103.6
Sample B Male 93.1
Sample C Female 96.4
Sample D Female 100.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.1
293259 Antisense, RP_040617_01_A06, Mouse strain C57BL/6J (56 days, male) 18.3
81599612 Antisense, RP_071126_01_B12, Mouse strain C57BL/6J (56 days, male) 13.8

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The Human Protein Atlas

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