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TPT1
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  • TPT1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:2153.4 nTPM
FANTOM5:989.8 Scaled Tags Per Million
Pig:513.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA039437Antibody CAB008364
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 2153.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 2153.4
Samples: 246

Max nTPM: 5470.3
Min nTPM: 919.5
Std nTPM: 541.8
Median nTPM: 2060.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 5470.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 4203.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 3908.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 3906.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 3762.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 3620.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 3442.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 3414.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 3352.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 3338.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 3238.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 3125.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 3117.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 3087.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 3039.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 2939.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 2907.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 2888.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 2887.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 2852.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 2840.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 2825.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 2779.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 2722.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 2717.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 2708.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 2706.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 2703.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 2702.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 2701.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 2698.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 2694.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 2678.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 2671.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 2638.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 2625.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 2610.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 2604.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 2601.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 2596.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 2587.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 2567.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 2566.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 2561.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 2553.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 2543.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 2541.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 2534.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 2533.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 2528.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 2523.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 2520.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 2499.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 2490.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 2486.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 2473.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 2468.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 2464.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 2447.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 2437.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 2416.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 2412.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 2408.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 2404.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 2394.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 2370.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 2361.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 2344.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 2321.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 2319.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 2316.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 2307.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 2304.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 2303.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 2296.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 2289.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 2286.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 2273.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 2269.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 2263.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 2260.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 2251.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 2235.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 2229.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 2226.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 2222.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 2218.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 2214.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 2204.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 2188.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 2179.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 2172.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 2172.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 2166.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 2165.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 2165.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 2162.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 2159.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 2154.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 2150.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 2129.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 2126.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 2122.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 2121.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 2120.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 2119.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 2118.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 2109.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 2108.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 2101.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 2099.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 2095.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 2093.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 2088.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 2087.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 2085.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 2081.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 2077.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 2071.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 2070.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 2067.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 2066.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 2064.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 2056.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 2053.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 2051.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 2049.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 2049.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 2045.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 2039.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 2037.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 2034.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 2031.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 2031.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 2016.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 2012.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 2004.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 2003.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 2001.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 1992.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1987.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 1986.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 1977.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1975.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1972.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1971.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 1969.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 1957.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 1956.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1952.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 1947.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1944.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1938.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1927.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 1927.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 1925.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 1925.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 1917.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1916.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1911.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 1911.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 1907.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 1897.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 1893.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1891.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 1890.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 1886.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 1886.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 1884.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1882.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 1876.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 1871.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1870.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1870.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1867.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 1855.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 1848.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 1846.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 1845.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 1845.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 1839.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 1839.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 1836.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 1815.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 1814.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1812.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 1808.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 1802.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1802.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 1797.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 1786.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1785.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 1776.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1775.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 1771.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 1769.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 1766.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 1762.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 1760.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 1758.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 1755.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 1752.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 1745.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 1744.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 1742.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 1739.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 1726.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 1724.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 1716.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 1715.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 1691.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 1688.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1670.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 1667.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 1664.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 1661.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 1655.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 1637.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 1633.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 1622.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 1605.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 1592.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1585.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 1568.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 1548.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 1546.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 1530.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 1528.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 1522.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 1493.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 1493.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 1493.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 1468.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 1458.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 1444.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 1439.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 1417.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 1410.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 1397.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1380.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 1373.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 1358.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 1308.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 1278.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1261.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 919.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 989.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 989.8
FF:10164-103B2 76 years, female 989.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 513.6
Pig sample Sample description nTPM
Caudate
nTPM: 513.6
Samples: 4

Max nTPM: 559.2
Min nTPM: 481.7
Sample A Female 516.2
Sample B Female 497.4
Sample C Male 559.2
Sample D Male 481.7

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