HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:69.6 nTPM
HPA:69.6 nTPM
GTEx:138.8 nTPM
FANTOM5:46.5 Scaled Tags Per Million
Pig:65.7 nTPM
Mouse:57.7 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 69.6
Sample id Sample description nTPM
Hippocampus
nTPM: 69.6
2621 Female, age 67, right hemisphere 97.1
2529 Female, age 94, left hemisphere 82.7
1911 Female, age 85, right hemisphere 61.6
1898 Male, age 80, left hemisphere 60.2
1855 Male, age 76, left hemisphere 58.7
2148 Female, age 91, left hemisphere 57.5
Dentate gyrus
nTPM: 59.5
2531 Female, age 67, both hemispheres 72.4
1927 Female, age 91, both hemispheres 68.6
2530 Female, age 94, left hemisphere 67.5
2010 Male, age 76, both hemispheres 55.3
2528 Male, age 74, both hemispheres 49.4
2246 Female, age 85, both hemispheres 43.7
Entorhinal gyrus
nTPM: 61.4
2613 Female, age 94, left hemisphere 87.9
1787 Male, age 76, left hemisphere 62.6
2764 Male, age 80, right hemisphere 59.4
1938 Female, age 85, left hemisphere 59.2
2686 Male, age 75, right hemisphere 57.8
2117 Female, age 91, right hemisphere 41.4
Hippocampus, CA1
nTPM: 56.8
2749 Male, age 80, left hemisphere 83.0
2527 Male, age 74, both hemispheres 64.6
1873 Female, age 85, both hemispheres 57.7
2082 Female, age 91, right hemisphere 44.1
2045 Male, age 76, both hemispheres 34.4
Hippocampus, CA2
nTPM: 63.3
1963 Male, age 80, left hemisphere 114.8
2437 Female, age 94, left hemisphere 69.3
1892 Male, age 76, both hemispheres 66.1
2113 Female, age 91, right hemisphere 51.8
2249 Male, age 74, both hemispheres 42.9
1940 Female, age 85, left hemisphere 35.0
Hippocampus, CA3
nTPM: 60.9
2861 Female, age 67, both hemispheres 96.0
2137 Male, age 80, left hemisphere 78.8
1867 Male, age 76, both hemispheres 53.8
2620 Female, age 94, left hemisphere 50.4
2436 Male, age 74, both hemispheres 43.5
1891 Female, age 85, both hemispheres 43.0
Parahippocampal cortex
nTPM: 56.7
2622 Female, age 67, right hemisphere 74.8
2245 Female, age 91, both hemispheres 73.1
2250 Female, age 67, right hemisphere 61.2
1933 Female, age 85, both hemispheres 54.4
2692 Male, age 74, both hemispheres 53.7
1990 Female, age 91, right hemisphere 51.1
2693 Female, age 94, both hemispheres 51.1
2018 Male, age 76, both hemispheres 51.0
1850 Male, age 80, both hemispheres 48.2
2532 Female, age 72, left hemisphere 48.2
Perirhinal gyrus
nTPM: 57.7
1847 Female, age 91, left hemisphere 65.8
2521 Female, age 94, right hemisphere 65.5
1794 Male, age 80, right hemisphere 58.1
1841 Female, age 85, right hemisphere 52.2
2848 Male, age 76, right hemisphere 46.9
Subiculum
nTPM: 48.3
2619 Male, age 74, both hemispheres 58.5
2438 Female, age 94, left hemisphere 50.3
1977 Female, age 85, both hemispheres 49.1
1901 Male, age 80, both hemispheres 47.6
2042 Male, age 76, both hemispheres 42.7
2729 Female, age 91, right hemisphere 41.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 138.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 138.8
Samples: 197

Max nTPM: 482.1
Min nTPM: 18.9
Std nTPM: 72.8
Median nTPM: 132.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 482.1
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 365.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 360.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 348.6
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 324.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 321.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 318.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 304.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 281.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 269.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 268.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.5
FF:10153-102I9 76 years, female 55.4
FF:10169-103B7 60 years, female 37.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 65.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 57.7
Samples: 4

Max nTPM: 70.1
Min nTPM: 44.4
Sample A Female 70.1
Sample B Female 62.1
Sample C Male 54.2
Sample D Male 44.4
Entorhinal cortex
nTPM: 65.7
Samples: 4

Max nTPM: 80.8
Min nTPM: 57.1
Sample A Female 63.6
Sample B Female 61.3
Sample C Male 80.8
Sample D Male 57.1
Subiculum
nTPM: 62.7
Samples: 4

Max nTPM: 82.7
Min nTPM: 49.5
Sample A Female 82.7
Sample B Female 59.9
Sample C Male 58.7
Sample D Male 49.5
Ventral hippocampus
nTPM: 60.8
Samples: 4

Max nTPM: 76.1
Min nTPM: 46.5
Sample A Female 51.6
Sample B Female 46.5
Sample C Male 76.1
Sample D Male 69.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 57.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.6
Samples: 4

Max nTPM: 59.1
Min nTPM: 56.7
Sample A Male 57.5
Sample B Male 56.7
Sample C Female 57.2
Sample D Female 59.1
Hippocampal formation
nTPM: 57.7
Samples: 4

Max nTPM: 61.2
Min nTPM: 52.7
Sample A Male 60.1
Sample B Male 52.7
Sample C Female 56.9
Sample D Female 61.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
69169469 Antisense, RP_050321_03_F04, Mouse strain C57BL/6J (56 days, male) 1.6

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