HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:5.7 nTPM
HPA:5.7 nTPM
GTEx:19.8 nTPM
FANTOM5:26.4 Scaled Tags Per Million
Mouse:21.5 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053769
Glial cells Not detected
Neuronal cells Not detected

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 5.7
Sample id Sample description nTPM
Hippocampus
nTPM: 3.7
2621 Female, age 67, right hemisphere 6.9
2529 Female, age 94, left hemisphere 4.0
1911 Female, age 85, right hemisphere 3.6
2148 Female, age 91, left hemisphere 3.6
1898 Male, age 80, left hemisphere 2.1
1855 Male, age 76, left hemisphere 1.8
Dentate gyrus
nTPM: 3.4
2530 Female, age 94, left hemisphere 5.5
2531 Female, age 67, both hemispheres 4.7
2246 Female, age 85, both hemispheres 3.2
1927 Female, age 91, both hemispheres 2.8
2010 Male, age 76, both hemispheres 2.3
2528 Male, age 74, both hemispheres 2.1
Entorhinal gyrus
nTPM: 5.7
2613 Female, age 94, left hemisphere 8.3
2764 Male, age 80, right hemisphere 6.9
1787 Male, age 76, left hemisphere 5.2
2117 Female, age 91, right hemisphere 5.1
2686 Male, age 75, right hemisphere 4.9
1938 Female, age 85, left hemisphere 3.8
Hippocampus, CA1
nTPM: 2.3
1873 Female, age 85, both hemispheres 3.2
2082 Female, age 91, right hemisphere 2.9
2527 Male, age 74, both hemispheres 2.5
2045 Male, age 76, both hemispheres 1.7
2749 Male, age 80, left hemisphere 1.3
Hippocampus, CA2
nTPM: 2.9
2437 Female, age 94, left hemisphere 4.4
1963 Male, age 80, left hemisphere 3.9
1940 Female, age 85, left hemisphere 2.8
1892 Male, age 76, both hemispheres 2.4
2249 Male, age 74, both hemispheres 2.3
2113 Female, age 91, right hemisphere 1.5
Hippocampus, CA3
nTPM: 2.8
2861 Female, age 67, both hemispheres 6.2
2620 Female, age 94, left hemisphere 4.3
1891 Female, age 85, both hemispheres 2.9
1867 Male, age 76, both hemispheres 2.4
2137 Male, age 80, left hemisphere 0.6
2436 Male, age 74, both hemispheres 0.2
Parahippocampal cortex
nTPM: 3.6
2532 Female, age 72, left hemisphere 6.3
2622 Female, age 67, right hemisphere 5.6
2245 Female, age 91, both hemispheres 4.9
1990 Female, age 91, right hemisphere 4.7
2692 Male, age 74, both hemispheres 4.6
1933 Female, age 85, both hemispheres 4.0
1850 Male, age 80, both hemispheres 2.0
2018 Male, age 76, both hemispheres 1.8
2250 Female, age 67, right hemisphere 1.3
2693 Female, age 94, both hemispheres 1.2
Perirhinal gyrus
nTPM: 2.7
2521 Female, age 94, right hemisphere 3.5
1794 Male, age 80, right hemisphere 3.3
2848 Male, age 76, right hemisphere 2.6
1841 Female, age 85, right hemisphere 2.0
1847 Female, age 91, left hemisphere 1.9
Subiculum
nTPM: 4.4
2619 Male, age 74, both hemispheres 6.0
1901 Male, age 80, both hemispheres 4.7
2042 Male, age 76, both hemispheres 4.6
1977 Female, age 85, both hemispheres 4.4
2438 Female, age 94, left hemisphere 4.3
2729 Female, age 91, right hemisphere 2.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.8
Samples: 197

Max nTPM: 35.2
Min nTPM: 4.8
Std nTPM: 5.1
Median nTPM: 19.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 35.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 33.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 33.0
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 31.6
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 31.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 31.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 31.2
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 29.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 29.7
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 29.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 29.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.4
FF:10153-102I9 76 years, female 36.0
FF:10169-103B7 60 years, female 16.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.5
Samples: 4

Max nTPM: 22.4
Min nTPM: 20.6
Sample A Male 20.6
Sample B Male 20.9
Sample C Female 22.4
Sample D Female 21.9
Hippocampal formation
nTPM: 19.3
Samples: 4

Max nTPM: 21.2
Min nTPM: 17.7
Sample A Male 21.2
Sample B Male 19.1
Sample C Female 17.7
Sample D Female 19.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68920701 Antisense, RP_050303_01_A10, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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