HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:428.4 nTPM
HPA:428.4 nTPM
GTEx:419.2 nTPM
FANTOM5:516.6 Scaled Tags Per Million
Pig:458.2 nTPM
Mouse:761.1 nTPM
Allen mouse:25.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015649Antibody HPA015650
Glial cells Not detectedHigh
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 428.4
Sample id Sample description nTPM
Hippocampus
nTPM: 315.4
1898 Male, age 80, left hemisphere 432.1
1855 Male, age 76, left hemisphere 342.6
2621 Female, age 67, right hemisphere 338.2
1911 Female, age 85, right hemisphere 270.6
2148 Female, age 91, left hemisphere 264.2
2529 Female, age 94, left hemisphere 245.0
Dentate gyrus
nTPM: 323.5
1927 Female, age 91, both hemispheres 386.1
2010 Male, age 76, both hemispheres 364.3
2530 Female, age 94, left hemisphere 325.6
2246 Female, age 85, both hemispheres 317.6
2528 Male, age 74, both hemispheres 289.7
2531 Female, age 67, both hemispheres 257.6
Entorhinal gyrus
nTPM: 335.0
2764 Male, age 80, right hemisphere 394.0
1938 Female, age 85, left hemisphere 384.7
1787 Male, age 76, left hemisphere 359.4
2613 Female, age 94, left hemisphere 352.6
2117 Female, age 91, right hemisphere 278.0
2686 Male, age 75, right hemisphere 241.5
Hippocampus, CA1
nTPM: 356.4
2749 Male, age 80, left hemisphere 505.5
1873 Female, age 85, both hemispheres 372.5
2045 Male, age 76, both hemispheres 333.0
2527 Male, age 74, both hemispheres 296.9
2082 Female, age 91, right hemisphere 274.0
Hippocampus, CA2
nTPM: 350.0
1892 Male, age 76, both hemispheres 473.0
1963 Male, age 80, left hemisphere 411.6
1940 Female, age 85, left hemisphere 326.7
2249 Male, age 74, both hemispheres 312.1
2437 Female, age 94, left hemisphere 306.0
2113 Female, age 91, right hemisphere 270.7
Hippocampus, CA3
nTPM: 321.2
2137 Male, age 80, left hemisphere 381.5
1867 Male, age 76, both hemispheres 378.6
2620 Female, age 94, left hemisphere 331.9
1891 Female, age 85, both hemispheres 318.2
2436 Male, age 74, both hemispheres 283.7
2861 Female, age 67, both hemispheres 233.1
Parahippocampal cortex
nTPM: 339.6
1850 Male, age 80, both hemispheres 456.5
1933 Female, age 85, both hemispheres 382.9
1990 Female, age 91, right hemisphere 361.7
2250 Female, age 67, right hemisphere 354.4
2693 Female, age 94, both hemispheres 346.3
2245 Female, age 91, both hemispheres 336.0
2532 Female, age 72, left hemisphere 331.2
2018 Male, age 76, both hemispheres 307.0
2622 Female, age 67, right hemisphere 262.1
2692 Male, age 74, both hemispheres 258.3
Perirhinal gyrus
nTPM: 428.4
1847 Female, age 91, left hemisphere 481.2
1794 Male, age 80, right hemisphere 454.1
1841 Female, age 85, right hemisphere 437.3
2521 Female, age 94, right hemisphere 396.4
2848 Male, age 76, right hemisphere 372.8
Subiculum
nTPM: 307.8
1977 Female, age 85, both hemispheres 364.2
1901 Male, age 80, both hemispheres 358.8
2438 Female, age 94, left hemisphere 306.8
2619 Male, age 74, both hemispheres 286.8
2042 Male, age 76, both hemispheres 281.3
2729 Female, age 91, right hemisphere 249.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 419.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 419.2
Samples: 197

Max nTPM: 1184.9
Min nTPM: 109.1
Std nTPM: 183.0
Median nTPM: 379.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 1184.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 959.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 859.5
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 836.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 829.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 809.1
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 804.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 800.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 768.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 756.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 736.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 516.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 516.6
FF:10169-103B7 60 years, female 572.3
FF:10153-102I9 76 years, female 460.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 458.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 458.2
Samples: 4

Max nTPM: 585.2
Min nTPM: 320.9
Sample A Female 585.2
Sample B Female 516.4
Sample C Male 410.2
Sample D Male 320.9
Entorhinal cortex
nTPM: 415.9
Samples: 4

Max nTPM: 431.2
Min nTPM: 385.4
Sample A Female 415.8
Sample B Female 431.2
Sample C Male 431.2
Sample D Male 385.4
Subiculum
nTPM: 412.1
Samples: 4

Max nTPM: 504.6
Min nTPM: 356.0
Sample A Female 504.6
Sample B Female 381.9
Sample C Male 405.7
Sample D Male 356.0
Ventral hippocampus
nTPM: 434.5
Samples: 4

Max nTPM: 494.1
Min nTPM: 308.6
Sample A Female 494.1
Sample B Female 308.6
Sample C Male 481.9
Sample D Male 453.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 761.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 761.1
Samples: 4

Max nTPM: 877.1
Min nTPM: 711.4
Sample A Male 711.4
Sample B Male 738.9
Sample C Female 717.1
Sample D Female 877.1
Hippocampal formation
nTPM: 740.4
Samples: 4

Max nTPM: 801.2
Min nTPM: 678.0
Sample A Male 725.7
Sample B Male 756.6
Sample C Female 801.2
Sample D Female 678.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 25.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 25.2
83161 Antisense, RP_040407_01_G06, Mouse strain C57BL/6J (56 days, male) 25.6
70812889 Antisense, RP_050712_02_G12, Mouse strain C57BL/6J (56 days, male) 24.8

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The Human Protein Atlas

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