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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:301.5 nTPM
FANTOM5:432.5 Scaled Tags Per Million
Pig:310.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA015649Antibody HPA015650
Glial cells Not detectedMedium
Neuronal cells MediumMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 301.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 301.5
Samples: 246

Max nTPM: 852.5
Min nTPM: 133.1
Std nTPM: 95.0
Median nTPM: 297.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 852.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 628.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 554.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 542.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 517.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 493.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 478.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 471.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 460.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 459.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 453.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 448.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 440.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 436.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 436.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 431.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 429.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 428.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 427.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 421.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 415.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 413.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 411.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 409.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 408.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 406.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 405.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 403.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 402.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 401.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 401.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 399.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 399.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 399.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 396.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 396.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 395.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 394.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 393.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 392.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 390.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 388.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 387.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 386.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 383.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 381.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 378.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 377.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 374.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 374.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 373.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 372.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 372.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 372.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 369.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 369.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 366.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 366.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 365.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 365.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 365.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 364.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 363.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 363.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 362.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 361.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 361.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 359.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 355.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 352.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 352.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 352.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 350.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 350.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 350.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 349.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 349.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 347.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 346.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 346.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 346.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 346.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 341.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 340.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 338.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 337.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 337.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 337.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 336.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 336.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 333.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 333.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 329.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 326.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 326.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 323.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 321.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 321.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 321.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 320.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 320.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 320.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 320.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 317.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 315.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 314.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 314.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 314.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 312.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 311.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 311.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 309.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 308.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 307.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 307.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 305.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 305.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 305.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 302.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 302.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 299.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 299.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 298.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 296.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 296.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 296.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 294.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 294.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 293.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 293.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 292.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 291.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 288.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 287.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 287.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 286.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 286.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 285.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 282.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 282.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 280.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 279.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 279.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 277.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 275.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 275.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 275.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 271.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 270.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 269.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 269.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 268.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 267.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 264.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 263.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 263.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 259.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 258.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 258.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 257.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 257.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 256.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 252.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 252.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 251.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 251.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 250.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 250.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 249.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 245.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 245.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 245.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 242.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 241.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 241.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 240.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 236.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 233.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 231.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 230.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 229.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 229.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 229.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 227.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 227.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 227.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 226.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 223.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 223.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 221.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 219.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 217.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 217.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 217.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 216.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 215.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 215.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 214.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 212.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 210.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 209.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 206.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 205.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 202.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 201.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 201.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 197.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 196.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 195.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 194.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 194.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 194.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 194.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 192.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 191.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 190.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 190.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 188.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 187.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 187.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 186.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 185.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 185.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 185.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 185.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 184.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 182.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 180.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 178.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 174.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 170.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 170.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 167.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 165.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 165.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 165.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 164.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 162.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 161.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 155.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 152.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 151.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 149.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 144.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 144.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 133.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 432.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 432.5
FF:10164-103B2 76 years, female 432.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 310.3
Pig sample Sample description nTPM
Caudate
nTPM: 310.3
Samples: 4

Max nTPM: 360.0
Min nTPM: 280.6
Sample A Female 289.9
Sample B Female 310.8
Sample C Male 360.0
Sample D Male 280.6

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