HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:205.1 nTPM
HPA:205.1 nTPM
GTEx:234.2 nTPM
FANTOM5:246.7 Scaled Tags Per Million
Pig:314.3 nTPM
Mouse:438.5 nTPM
Allen mouse:2.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007925Antibody CAB010286
Glial cells Not detectedNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 205.1
Sample id Sample description nTPM
Hippocampus
nTPM: 184.8
1898 Male, age 80, left hemisphere 206.5
1855 Male, age 76, left hemisphere 200.8
1911 Female, age 85, right hemisphere 182.0
2621 Female, age 67, right hemisphere 180.3
2529 Female, age 94, left hemisphere 174.7
2148 Female, age 91, left hemisphere 164.3
Dentate gyrus
nTPM: 193.0
2010 Male, age 76, both hemispheres 223.6
2530 Female, age 94, left hemisphere 205.6
2246 Female, age 85, both hemispheres 192.1
1927 Female, age 91, both hemispheres 189.5
2528 Male, age 74, both hemispheres 177.8
2531 Female, age 67, both hemispheres 169.5
Entorhinal gyrus
nTPM: 182.3
2764 Male, age 80, right hemisphere 193.9
1938 Female, age 85, left hemisphere 192.4
2117 Female, age 91, right hemisphere 192.0
1787 Male, age 76, left hemisphere 175.8
2613 Female, age 94, left hemisphere 175.2
2686 Male, age 75, right hemisphere 164.2
Hippocampus, CA1
nTPM: 205.1
2045 Male, age 76, both hemispheres 226.9
2749 Male, age 80, left hemisphere 219.3
1873 Female, age 85, both hemispheres 209.0
2082 Female, age 91, right hemisphere 193.2
2527 Male, age 74, both hemispheres 177.1
Hippocampus, CA2
nTPM: 188.6
1892 Male, age 76, both hemispheres 211.8
1963 Male, age 80, left hemisphere 203.6
2249 Male, age 74, both hemispheres 191.0
1940 Female, age 85, left hemisphere 181.5
2437 Female, age 94, left hemisphere 176.1
2113 Female, age 91, right hemisphere 167.8
Hippocampus, CA3
nTPM: 179.5
1867 Male, age 76, both hemispheres 201.1
1891 Female, age 85, both hemispheres 189.2
2137 Male, age 80, left hemisphere 179.3
2620 Female, age 94, left hemisphere 179.1
2436 Male, age 74, both hemispheres 171.9
2861 Female, age 67, both hemispheres 156.3
Parahippocampal cortex
nTPM: 176.1
1933 Female, age 85, both hemispheres 195.1
1850 Male, age 80, both hemispheres 193.2
2018 Male, age 76, both hemispheres 187.3
1990 Female, age 91, right hemisphere 183.0
2532 Female, age 72, left hemisphere 173.6
2693 Female, age 94, both hemispheres 172.0
2250 Female, age 67, right hemisphere 171.6
2245 Female, age 91, both hemispheres 171.4
2692 Male, age 74, both hemispheres 169.3
2622 Female, age 67, right hemisphere 144.3
Perirhinal gyrus
nTPM: 191.6
1847 Female, age 91, left hemisphere 200.9
2521 Female, age 94, right hemisphere 195.3
1841 Female, age 85, right hemisphere 193.7
1794 Male, age 80, right hemisphere 186.9
2848 Male, age 76, right hemisphere 181.4
Subiculum
nTPM: 187.4
2042 Male, age 76, both hemispheres 202.4
1977 Female, age 85, both hemispheres 201.6
1901 Male, age 80, both hemispheres 200.9
2438 Female, age 94, left hemisphere 179.7
2729 Female, age 91, right hemisphere 171.2
2619 Male, age 74, both hemispheres 168.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 234.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 234.2
Samples: 197

Max nTPM: 411.2
Min nTPM: 98.9
Std nTPM: 46.7
Median nTPM: 232.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 411.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 382.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 376.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 363.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 335.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 334.5
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 327.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 326.4
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 326.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 308.3
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 306.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 246.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 246.7
FF:10169-103B7 60 years, female 262.6
FF:10153-102I9 76 years, female 230.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 314.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 314.3
Samples: 4

Max nTPM: 448.0
Min nTPM: 198.4
Sample A Female 448.0
Sample B Female 302.6
Sample C Male 308.2
Sample D Male 198.4
Entorhinal cortex
nTPM: 234.8
Samples: 4

Max nTPM: 264.9
Min nTPM: 184.8
Sample A Female 260.6
Sample B Female 264.9
Sample C Male 228.7
Sample D Male 184.8
Subiculum
nTPM: 268.0
Samples: 4

Max nTPM: 352.2
Min nTPM: 225.4
Sample A Female 352.2
Sample B Female 255.0
Sample C Male 225.4
Sample D Male 239.4
Ventral hippocampus
nTPM: 284.8
Samples: 4

Max nTPM: 346.5
Min nTPM: 202.8
Sample A Female 346.5
Sample B Female 202.8
Sample C Male 311.6
Sample D Male 278.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 438.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 363.8
Samples: 4

Max nTPM: 389.0
Min nTPM: 333.7
Sample A Male 357.0
Sample B Male 375.3
Sample C Female 389.0
Sample D Female 333.7
Hippocampal formation
nTPM: 438.5
Samples: 4

Max nTPM: 474.1
Min nTPM: 401.1
Sample A Male 474.1
Sample B Male 401.1
Sample C Female 455.6
Sample D Female 423.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.9
1130 Antisense, RP_Baylor_103129, Mouse strain C57BL/6J (56 days, male) 8.5
1131 Antisense, RP_Baylor_103129, Mouse strain C57BL/6J (56 days, male) 7.7
70566163 Antisense, RP_050628_02_D11, Mouse strain C57BL/6J (56 days, male) 0.3
73931419 Antisense, RP_051214_04_E11, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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