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RPS6
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  • RPS6
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:978.7 nTPM
FANTOM5:129.5 Scaled Tags Per Million
Pig:37.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA031153Antibody CAB004027
Glial cells MediumLow
Neuronal cells HighHigh





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 978.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 978.7
Samples: 246

Max nTPM: 2448.3
Min nTPM: 412.5
Std nTPM: 295.8
Median nTPM: 910.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 2448.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 2195.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2139.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1887.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1849.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1825.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1726.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1724.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1686.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1654.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1644.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1478.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1471.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1447.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1442.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1423.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1402.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1393.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1388.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1374.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1373.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1362.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1356.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1341.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1327.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1315.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1313.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1297.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1293.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1286.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1281.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1275.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1275.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 1273.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1252.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1248.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1245.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1232.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1224.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1209.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1200.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1198.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1197.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1196.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1190.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 1185.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1177.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1176.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1174.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1173.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1171.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1159.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1155.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1152.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1152.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1150.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1147.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1146.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1146.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1144.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1144.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1136.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 1135.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1132.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 1126.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 1119.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1119.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1105.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1105.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1099.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 1095.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1095.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1093.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1090.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 1078.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1076.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1062.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 1061.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1057.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1056.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 1049.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1042.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1042.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 1032.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1031.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 1031.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 1028.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1023.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1021.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1020.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 1019.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 1010.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 1006.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 1006.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 1003.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 993.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 987.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 984.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 979.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 978.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 974.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 970.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 967.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 960.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 959.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 958.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 957.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 957.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 956.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 949.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 949.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 938.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 934.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 934.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 933.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 928.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 927.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 926.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 925.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 921.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 919.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 913.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 912.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 909.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 904.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 903.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 901.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 900.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 893.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 891.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 887.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 881.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 881.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 879.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 874.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 873.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 872.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 872.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 871.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 869.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 868.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 867.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 866.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 865.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 864.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 863.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 861.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 861.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 859.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 858.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 857.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 857.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 854.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 851.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 851.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 845.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 844.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 844.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 844.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 843.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 840.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 836.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 836.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 834.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 830.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 828.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 827.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 826.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 821.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 818.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 811.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 802.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 801.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 798.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 796.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 796.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 793.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 789.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 788.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 788.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 787.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 785.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 782.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 777.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 777.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 773.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 772.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 770.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 768.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 767.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 766.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 763.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 762.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 761.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 759.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 748.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 742.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 742.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 739.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 739.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 734.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 729.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 727.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 725.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 724.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 724.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 714.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 713.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 710.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 708.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 707.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 705.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 705.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 702.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 702.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 701.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 697.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 697.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 695.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 690.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 687.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 683.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 681.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 679.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 664.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 664.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 656.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 643.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 637.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 634.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 632.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 628.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 628.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 623.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 620.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 612.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 610.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 605.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 595.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 585.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 583.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 583.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 582.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 574.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 537.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 412.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 129.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 129.5
FF:10164-103B2 76 years, female 129.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 37.1
Pig sample Sample description nTPM
Caudate
nTPM: 37.1
Samples: 4

Max nTPM: 40.5
Min nTPM: 32.2
Sample A Female 40.5
Sample B Female 37.2
Sample C Male 38.4
Sample D Male 32.2

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