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BRAIN THALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Thalamus
THALAMUS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1538.2 nTPM
HPA:1538.2 nTPM
FANTOM5:1108.7 Scaled Tags Per Million

THALAMUS - HPA Brain RNA-seq
Max nTPM 1538.2
Sample id Sample description nTPM
Anterior thalamic nucleus, ventral
nTPM: 1492.3
2396 Male, age 61, right hemisphere 1563.4
2497 Male, age 66, unknown 1472.7
2032 Female, age 42, unknown 1440.9
Centromedial thalamic nucleus
nTPM: 1487.8
2279 Female, age 85, left hemisphere 1504.8
2401 Male, age 76, right hemisphere 1470.7
Habenula
nTPM: 1456.1
1957 Male, age 80, both hemispheres 1501.8
2203 Male, age 61, left hemisphere 1459.9
2252 Male, age 62, unknown 1438.8
2276 Male, age 66, unknown 1423.8
Lateral geniculate body
nTPM: 1498.6
2857 Male, age 74, right hemisphere 1544.3
2575 Female, age 94, right hemisphere 1527.8
2659 Male, age 66, unknown 1527.6
2841 Male, age 80, both hemispheres 1498.8
1953 Male, age 62, unknown 1498.3
2399 Male, age 61, left hemisphere 1483.1
2035 Female, age 72, unknown 1471.3
2106 Female, age 67, right hemisphere 1437.6
Lateral thalamic nuclei
nTPM: 1498.3
2661 Female, age 72, unknown 1520.4
2573 Female, age 94, left hemisphere 1510.1
2577 Male, age 74, both hemispheres 1509.5
2765 Female, age 67, both hemispheres 1495.9
1903 Male, age 76, left hemisphere 1455.6
Medial dorsal thalamic nucleus
nTPM: 1478.3
2572 Female, age 94, right hemisphere 1563.8
2660 Female, age 72, unknown 1502.2
2039 Female, age 72, unknown 1482.9
1810 Male, age 48, unknown 1482.2
1930 Female, age 42, unknown 1481.9
1859 Male, age 76, both hemispheres 1481.7
2498 Male, age 66, unknown 1472.0
2026 Male, age 62, unknown 1471.0
1971 Male, age 61, right hemisphere 1468.2
2576 Male, age 74, both hemispheres 1465.3
2402 Female, age 67, both hemispheres 1459.6
2283 Male, age 80, right hemisphere 1444.9
2492 Male, age 75, right hemisphere 1441.6
Medial geniculate body
nTPM: 1492.2
2650 Female, age 94, left hemisphere 1517.0
2049 Male, age 76, both hemispheres 1509.9
2571 Male, age 75, right hemisphere 1506.1
2207 Male, age 80, right hemisphere 1496.7
1811 Female, age 42, unknown 1482.3
2657 Male, age 74, right hemisphere 1478.7
2217 Female, age 72, unknown 1454.7
Nucleus reuniens
nTPM: 1522.0
2210 Female, age 85, left hemisphere 1535.1
2212 Female, age 67, left hemisphere 1520.3
2205 Male, age 80, left hemisphere 1510.6
Nucleus rhomboideus
nTPM: 1499.1
2213 Female, age 67, left hemisphere 1518.4
2280 Female, age 85, left hemisphere 1509.2
2206 Male, age 80, both hemispheres 1469.6
Posterior thalamic nucleus
nTPM: 1538.2
2649 Female, age 94, both hemispheres 1736.1
2655 Male, age 74, right hemisphere 1490.2
2495 Female, age 67, right hemisphere 1475.6
2266 Male, age 76, right hemisphere 1450.8
Pulvinar
nTPM: 1476.4
2724 Male, age 74, right hemisphere 1550.7
2214 Male, age 76, right hemisphere 1485.3
2496 Female, age 67, right hemisphere 1483.8
2398 Male, age 61, left hemisphere 1478.7
2499 Male, age 66, unknown 1477.1
1929 Male, age 48, unknown 1477.0
2582 Female, age 72, unknown 1471.8
1932 Male, age 80, right hemisphere 1466.1
1972 Male, age 62, unknown 1458.5
1899 Female, age 42, unknown 1414.6
Subthalamic nucleus
nTPM: 1490.9
2124 Male, age 62, unknown 1538.3
2658 Male, age 74, both hemispheres 1537.6
2282 Male, age 61, both hemispheres 1486.5
2216 Male, age 48, unknown 1485.8
2275 Male, age 66, unknown 1485.1
2779 Female, age 42, unknown 1485.0
2056 Female, age 72, unknown 1469.2
2406 Female, age 72, unknown 1439.9
Ventral posterolateral thalamic nucleus
nTPM: 1477.0
2578 Male, age 74, both hemispheres 1517.8
2397 Male, age 61, right hemisphere 1516.2
2570 Male, age 75, right hemisphere 1471.1
2197 Male, age 80, both hemispheres 1470.5
2740 Male, age 76, right hemisphere 1444.9
2581 Female, age 72, unknown 1441.4
Ventral posteromedial thalamic nucleus
nTPM: 1468.3
2653 Male, age 74, both hemispheres 1505.0
2127 Male, age 76, right hemisphere 1471.5
2202 Male, age 61, left hemisphere 1468.4
2281 Male, age 75, right hemisphere 1455.1
2758 Male, age 80, both hemispheres 1441.5
Ventral thalamic nuclei
nTPM: 1490.7
2580 Male, age 66, unknown 1542.3
2204 Male, age 80, both hemispheres 1499.6
2291 Female, age 72, unknown 1498.0
1860 Male, age 76, both hemispheres 1494.7
2652 Male, age 74, left hemisphere 1489.6
1845 Male, age 48, unknown 1483.2
2285 Male, age 62, unknown 1477.1
1912 Female, age 42, unknown 1470.6
2858 Female, age 72, unknown 1460.8
Ventromedial nucleus
nTPM: 1487.1
1982 Female, age 72, unknown 1490.3
1822 Female, age 42, unknown 1484.0
Zona incerta
nTPM: 1502.0
2822 Male, age 74, right hemisphere 1555.4
2403 Male, age 62, unknown 1501.8
2215 Male, age 66, unknown 1497.8
2663 Female, age 72, unknown 1487.7
2208 Male, age 80, right hemisphere 1467.1

THALAMUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1108.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Thalamus
Scaled Tags Per Million: 1108.7
FF:10154-103A1 76 years, female 1108.7

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