HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:31.8 nTPM
HPA:31.8 nTPM
GTEx:38.2 nTPM
FANTOM5:50.7 Scaled Tags Per Million
Pig:23.3 nTPM
Mouse:67.9 nTPM
Allen mouse:13.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044615
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.8
Sample id Sample description nTPM
Hippocampus
nTPM: 31.6
2621 Female, age 67, right hemisphere 33.5
2148 Female, age 91, left hemisphere 32.0
1898 Male, age 80, left hemisphere 31.7
1855 Male, age 76, left hemisphere 31.2
2529 Female, age 94, left hemisphere 30.9
1911 Female, age 85, right hemisphere 30.5
Dentate gyrus
nTPM: 30.9
2530 Female, age 94, left hemisphere 32.0
1927 Female, age 91, both hemispheres 31.7
2010 Male, age 76, both hemispheres 31.0
2246 Female, age 85, both hemispheres 30.3
2531 Female, age 67, both hemispheres 30.3
2528 Male, age 74, both hemispheres 30.0
Entorhinal gyrus
nTPM: 31.5
2686 Male, age 75, right hemisphere 32.2
1938 Female, age 85, left hemisphere 32.0
1787 Male, age 76, left hemisphere 31.8
2764 Male, age 80, right hemisphere 31.7
2613 Female, age 94, left hemisphere 31.1
2117 Female, age 91, right hemisphere 30.4
Hippocampus, CA1
nTPM: 31.5
2749 Male, age 80, left hemisphere 33.2
2527 Male, age 74, both hemispheres 31.8
1873 Female, age 85, both hemispheres 31.4
2045 Male, age 76, both hemispheres 31.2
2082 Female, age 91, right hemisphere 29.6
Hippocampus, CA2
nTPM: 31.4
1892 Male, age 76, both hemispheres 33.3
1963 Male, age 80, left hemisphere 32.4
1940 Female, age 85, left hemisphere 31.1
2249 Male, age 74, both hemispheres 31.1
2437 Female, age 94, left hemisphere 30.7
2113 Female, age 91, right hemisphere 29.8
Hippocampus, CA3
nTPM: 31.5
2137 Male, age 80, left hemisphere 33.5
2861 Female, age 67, both hemispheres 32.0
1867 Male, age 76, both hemispheres 31.7
1891 Female, age 85, both hemispheres 31.4
2620 Female, age 94, left hemisphere 31.2
2436 Male, age 74, both hemispheres 29.3
Parahippocampal cortex
nTPM: 31.7
2250 Female, age 67, right hemisphere 33.0
2245 Female, age 91, both hemispheres 32.4
2622 Female, age 67, right hemisphere 32.0
2532 Female, age 72, left hemisphere 31.9
1933 Female, age 85, both hemispheres 31.7
1850 Male, age 80, both hemispheres 31.4
2018 Male, age 76, both hemispheres 31.3
2692 Male, age 74, both hemispheres 31.2
2693 Female, age 94, both hemispheres 31.2
1990 Female, age 91, right hemisphere 31.0
Perirhinal gyrus
nTPM: 31.8
1841 Female, age 85, right hemisphere 32.6
2848 Male, age 76, right hemisphere 32.2
1794 Male, age 80, right hemisphere 31.9
1847 Female, age 91, left hemisphere 31.9
2521 Female, age 94, right hemisphere 30.3
Subiculum
nTPM: 31.6
2438 Female, age 94, left hemisphere 36.6
2619 Male, age 74, both hemispheres 31.8
1977 Female, age 85, both hemispheres 31.5
2042 Male, age 76, both hemispheres 30.1
1901 Male, age 80, both hemispheres 29.9
2729 Female, age 91, right hemisphere 29.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.2
Samples: 197

Max nTPM: 72.6
Min nTPM: 20.0
Std nTPM: 8.1
Median nTPM: 37.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 72.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 64.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 58.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 56.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 55.7
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 55.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 55.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 54.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 54.4
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 53.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 52.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.7
FF:10153-102I9 76 years, female 52.3
FF:10169-103B7 60 years, female 49.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.3
Samples: 4

Max nTPM: 29.6
Min nTPM: 18.5
Sample A Female 29.6
Sample B Female 20.7
Sample C Male 24.2
Sample D Male 18.5
Entorhinal cortex
nTPM: 22.2
Samples: 4

Max nTPM: 24.0
Min nTPM: 19.4
Sample A Female 24.0
Sample B Female 22.6
Sample C Male 22.6
Sample D Male 19.4
Subiculum
nTPM: 20.3
Samples: 4

Max nTPM: 25.7
Min nTPM: 17.1
Sample A Female 25.7
Sample B Female 17.1
Sample C Male 19.4
Sample D Male 18.9
Ventral hippocampus
nTPM: 21.4
Samples: 4

Max nTPM: 26.1
Min nTPM: 15.4
Sample A Female 22.6
Sample B Female 15.4
Sample C Male 26.1
Sample D Male 21.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 67.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 61.7
Samples: 4

Max nTPM: 67.5
Min nTPM: 56.5
Sample A Male 64.5
Sample B Male 58.2
Sample C Female 67.5
Sample D Female 56.5
Hippocampal formation
nTPM: 67.9
Samples: 4

Max nTPM: 71.3
Min nTPM: 65.2
Sample A Male 71.3
Sample B Male 69.5
Sample C Female 65.6
Sample D Female 65.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.0
67815540 Antisense, RP_040920_01_G10, Mouse strain C57BL/6J (56 days, male) 13.0

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