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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:287.7 nTPM
FANTOM5:224.7 Scaled Tags Per Million
Pig:103.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA015996
Glial cells Medium
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 287.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 287.7
Samples: 246

Max nTPM: 477.0
Min nTPM: 175.7
Std nTPM: 50.7
Median nTPM: 282.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 477.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 447.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 436.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 431.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 426.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 419.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 413.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 412.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 395.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 386.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 384.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 382.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 379.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 375.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 372.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 372.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 370.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 370.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 367.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 365.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 363.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 361.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 360.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 360.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 359.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 358.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 355.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 354.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 353.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 352.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 352.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 352.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 348.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 347.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 346.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 346.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 343.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 343.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 341.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 340.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 338.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 338.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 336.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 335.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 331.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 329.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 329.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 328.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 327.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 324.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 322.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 321.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 321.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 321.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 319.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 319.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 318.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 317.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 316.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 316.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 316.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 316.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 316.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 315.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 314.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 312.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 310.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 310.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 306.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 305.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 305.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 303.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 303.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 302.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 302.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 302.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 301.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 300.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 300.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 298.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 298.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 298.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 297.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 297.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 297.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 295.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 295.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 295.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 295.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 294.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 292.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 292.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 292.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 290.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 290.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 289.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 289.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 289.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 289.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 288.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 288.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 288.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 288.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 286.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 286.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 286.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 285.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 285.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 285.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 284.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 284.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 284.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 284.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 283.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 283.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 283.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 283.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 283.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 282.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 282.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 282.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 282.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 282.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 281.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 281.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 281.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 280.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 280.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 279.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 278.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 278.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 278.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 276.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 275.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 274.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 273.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 273.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 273.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 273.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 273.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 272.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 272.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 272.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 272.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 270.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 269.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 269.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 268.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 268.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 268.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 267.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 267.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 267.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 267.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 267.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 266.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 266.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 266.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 264.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 263.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 262.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 262.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 262.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 261.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 261.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 260.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 260.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 259.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 258.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 258.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 258.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 258.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 257.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 256.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 256.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 256.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 255.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 255.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 255.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 254.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 254.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 254.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 254.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 254.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 253.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 253.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 253.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 253.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 252.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 251.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 250.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 250.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 250.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 250.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 249.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 248.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 247.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 247.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 246.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 245.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 244.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 244.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 243.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 243.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 243.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 242.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 241.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 240.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 240.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 239.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 239.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 239.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 237.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 237.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 237.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 237.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 236.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 236.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 235.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 235.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 234.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 233.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 232.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 231.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 229.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 229.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 229.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 228.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 227.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 227.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 226.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 223.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 223.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 221.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 219.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 216.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 211.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 207.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 207.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 205.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 205.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 200.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 200.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 182.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 181.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 175.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 224.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 224.7
FF:10164-103B2 76 years, female 224.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 103.9
Pig sample Sample description nTPM
Caudate
nTPM: 103.9
Samples: 4

Max nTPM: 114.6
Min nTPM: 95.6
Sample A Female 102.2
Sample B Female 103.3
Sample C Male 114.6
Sample D Male 95.6

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