AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:40.6 nTPM
HPA:40.6 nTPM
GTEx:45.1 nTPM
FANTOM5:130.9 Scaled Tags Per Million
Pig:37.2 nTPM
Mouse:62.3 nTPM
Allen mouse:4.9 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 40.6
Sample id Sample description nTPM
Amygdala
nTPM: 39.9
2814 Male, age 76, right hemisphere 42.5
2695 Female, age 67, right hemisphere 40.9
2514 Male, age 75, right hemisphere 40.6
1987 Female, age 91, left hemisphere 37.7
2517 Female, age 94, left hemisphere 37.7
Basal amygdala
nTPM: 39.0
2609 Male, age 75, right hemisphere 43.3
1955 Male, age 76, both hemispheres 40.5
2110 Male, age 80, left hemisphere 38.2
2827 Female, age 67, right hemisphere 37.7
2685 Female, age 94, left hemisphere 37.6
2243 Female, age 91, right hemisphere 37.0
Central amygdala
nTPM: 40.6
2826 Female, age 94, left hemisphere 44.7
2515 Male, age 75, right hemisphere 41.8
1905 Male, age 76, both hemispheres 40.2
2239 Male, age 80, left hemisphere 40.0
2701 Female, age 91, right hemisphere 36.3
Corticomedial amygdala
nTPM: 38.8
2829 Male, age 80, left hemisphere 43.7
2240 Male, age 76, both hemispheres 40.6
2428 Male, age 75, right hemisphere 40.2
2429 Female, age 94, left hemisphere 38.9
2242 Female, age 91, right hemisphere 35.6
2535 Female, age 67, right hemisphere 34.1
Lateral amygdala
nTPM: 40.4
2516 Male, age 75, right hemisphere 47.4
2534 Female, age 94, left hemisphere 42.6
1883 Male, age 76, both hemispheres 42.5
2830 Female, age 67, right hemisphere 40.7
2256 Male, age 80, left hemisphere 35.1
2255 Female, age 91, right hemisphere 33.7
Stria terminalis, bed nucleus
nTPM: 40.0
1974 Female, age 91, both hemispheres 42.4
2486 Female, age 94, both hemispheres 40.8
2201 Male, age 74, unknown 36.6

AMYGDALA - GTEx RNA-seqi
Average nTPM 45.1
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 45.1
Samples: 152

Max nTPM: 78.6
Min nTPM: 20.3
Std nTPM: 7.6
Median nTPM: 45.3
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 78.6
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 73.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 61.1
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 57.3
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 56.9
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 56.5
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 56.3
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 55.8
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 55.7
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 55.7
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 55.6
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 130.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 130.9
FF:10151-102I7 76 years, female 130.9

AMYGDALA - Pig RNA-seqi
Average nTPM 37.2
Pig sample Sample description nTPM
Amygdala
nTPM: 37.2
Samples: 4

Max nTPM: 39.4
Min nTPM: 35.1
Sample A Female 37.3
Sample B Female 39.4
Sample C Male 35.1
Sample D Male 37.0

AMYGDALA - Mouse RNA-seqi
Average nTPM 62.3
Mouse sample Sample description nTPM
Amygdala
nTPM: 62.3
Samples: 4

Max nTPM: 64.8
Min nTPM: 60.3
Sample A Male 61.4
Sample B Male 64.8
Sample C Female 60.3
Sample D Female 62.6

AMYGDALA - Allen Mouse ISHi
Max Expression energy 4.9
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 4.9
545119 Antisense, RP_040825_02_F02, Mouse strain C57BL/6J (56 days, male) 8.9
70794001 Antisense, RP_050712_01_B08, Mouse strain C57BL/6J (56 days, male) 1.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.