HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:45.5 nTPM
HPA:45.5 nTPM
GTEx:43.1 nTPM
FANTOM5:147.8 Scaled Tags Per Million
Pig:44.0 nTPM
Mouse:69.9 nTPM
Allen mouse:5.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040602
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.5
Sample id Sample description nTPM
Hippocampus
nTPM: 39.0
1898 Male, age 80, left hemisphere 45.8
1855 Male, age 76, left hemisphere 41.1
1911 Female, age 85, right hemisphere 38.2
2529 Female, age 94, left hemisphere 37.6
2621 Female, age 67, right hemisphere 36.9
2148 Female, age 91, left hemisphere 34.2
Dentate gyrus
nTPM: 39.7
2530 Female, age 94, left hemisphere 43.0
2010 Male, age 76, both hemispheres 42.8
1927 Female, age 91, both hemispheres 41.6
2246 Female, age 85, both hemispheres 38.4
2531 Female, age 67, both hemispheres 36.7
2528 Male, age 74, both hemispheres 35.5
Entorhinal gyrus
nTPM: 39.7
1787 Male, age 76, left hemisphere 43.7
1938 Female, age 85, left hemisphere 43.0
2764 Male, age 80, right hemisphere 40.6
2613 Female, age 94, left hemisphere 38.0
2686 Male, age 75, right hemisphere 36.8
2117 Female, age 91, right hemisphere 36.0
Hippocampus, CA1
nTPM: 40.9
2749 Male, age 80, left hemisphere 50.3
1873 Female, age 85, both hemispheres 42.7
2045 Male, age 76, both hemispheres 41.8
2527 Male, age 74, both hemispheres 36.4
2082 Female, age 91, right hemisphere 33.2
Hippocampus, CA2
nTPM: 41.0
1892 Male, age 76, both hemispheres 49.4
1963 Male, age 80, left hemisphere 47.4
2437 Female, age 94, left hemisphere 39.4
1940 Female, age 85, left hemisphere 38.9
2249 Male, age 74, both hemispheres 35.7
2113 Female, age 91, right hemisphere 35.2
Hippocampus, CA3
nTPM: 39.0
2137 Male, age 80, left hemisphere 46.0
1867 Male, age 76, both hemispheres 42.5
1891 Female, age 85, both hemispheres 40.6
2436 Male, age 74, both hemispheres 35.9
2620 Female, age 94, left hemisphere 34.6
2861 Female, age 67, both hemispheres 34.2
Parahippocampal cortex
nTPM: 40.1
1850 Male, age 80, both hemispheres 48.3
1933 Female, age 85, both hemispheres 43.1
2693 Female, age 94, both hemispheres 42.2
1990 Female, age 91, right hemisphere 41.7
2250 Female, age 67, right hemisphere 39.9
2532 Female, age 72, left hemisphere 38.9
2692 Male, age 74, both hemispheres 38.3
2245 Female, age 91, both hemispheres 38.0
2018 Male, age 76, both hemispheres 37.7
2622 Female, age 67, right hemisphere 33.4
Perirhinal gyrus
nTPM: 45.5
2848 Male, age 76, right hemisphere 46.8
1847 Female, age 91, left hemisphere 46.6
1794 Male, age 80, right hemisphere 46.5
1841 Female, age 85, right hemisphere 46.2
2521 Female, age 94, right hemisphere 41.4
Subiculum
nTPM: 37.8
1901 Male, age 80, both hemispheres 41.8
1977 Female, age 85, both hemispheres 41.1
2438 Female, age 94, left hemisphere 39.2
2042 Male, age 76, both hemispheres 36.6
2619 Male, age 74, both hemispheres 34.4
2729 Female, age 91, right hemisphere 33.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.1
Samples: 197

Max nTPM: 66.5
Min nTPM: 26.1
Std nTPM: 6.7
Median nTPM: 42.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 66.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 65.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 61.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 59.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 57.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 57.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 57.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 57.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 56.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 56.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 55.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 147.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 147.8
FF:10169-103B7 60 years, female 172.6
FF:10153-102I9 76 years, female 123.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 44.0
Samples: 4

Max nTPM: 44.9
Min nTPM: 42.7
Sample A Female 42.7
Sample B Female 44.9
Sample C Male 44.0
Sample D Male 44.5
Entorhinal cortex
nTPM: 40.6
Samples: 4

Max nTPM: 44.4
Min nTPM: 37.8
Sample A Female 37.8
Sample B Female 44.4
Sample C Male 41.6
Sample D Male 38.4
Subiculum
nTPM: 41.5
Samples: 4

Max nTPM: 43.9
Min nTPM: 40.2
Sample A Female 43.9
Sample B Female 41.2
Sample C Male 40.7
Sample D Male 40.2
Ventral hippocampus
nTPM: 39.0
Samples: 4

Max nTPM: 43.8
Min nTPM: 34.1
Sample A Female 38.3
Sample B Female 39.6
Sample C Male 34.1
Sample D Male 43.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 69.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.4
Samples: 4

Max nTPM: 66.4
Min nTPM: 61.5
Sample A Male 61.5
Sample B Male 66.4
Sample C Female 65.6
Sample D Female 63.9
Hippocampal formation
nTPM: 69.9
Samples: 4

Max nTPM: 74.8
Min nTPM: 62.6
Sample A Male 74.8
Sample B Male 71.2
Sample C Female 70.9
Sample D Female 62.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.8
545119 Antisense, RP_040825_02_F02, Mouse strain C57BL/6J (56 days, male) 10.3
70794001 Antisense, RP_050712_01_B08, Mouse strain C57BL/6J (56 days, male) 1.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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