HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:575.1 nTPM
HPA:575.1 nTPM
GTEx:512.9 nTPM
FANTOM5:1018.1 Scaled Tags Per Million
Pig:76.4 nTPM
Mouse:511.8 nTPM
Allen mouse:4.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001401Antibody CAB008670
Glial cells MediumHigh
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 575.1
Sample id Sample description nTPM
Hippocampus
nTPM: 555.9
1898 Male, age 80, left hemisphere 597.4
2529 Female, age 94, left hemisphere 561.7
2621 Female, age 67, right hemisphere 558.2
1855 Male, age 76, left hemisphere 547.5
1911 Female, age 85, right hemisphere 539.3
2148 Female, age 91, left hemisphere 531.4
Dentate gyrus
nTPM: 544.0
2010 Male, age 76, both hemispheres 569.0
1927 Female, age 91, both hemispheres 558.3
2246 Female, age 85, both hemispheres 547.8
2528 Male, age 74, both hemispheres 541.6
2530 Female, age 94, left hemisphere 539.8
2531 Female, age 67, both hemispheres 507.4
Entorhinal gyrus
nTPM: 548.4
1938 Female, age 85, left hemisphere 585.3
2764 Male, age 80, right hemisphere 575.4
1787 Male, age 76, left hemisphere 557.8
2117 Female, age 91, right hemisphere 537.3
2686 Male, age 75, right hemisphere 525.3
2613 Female, age 94, left hemisphere 509.4
Hippocampus, CA1
nTPM: 566.9
2749 Male, age 80, left hemisphere 636.2
1873 Female, age 85, both hemispheres 566.7
2527 Male, age 74, both hemispheres 563.7
2082 Female, age 91, right hemisphere 536.9
2045 Male, age 76, both hemispheres 531.0
Hippocampus, CA2
nTPM: 566.2
1892 Male, age 76, both hemispheres 615.4
2249 Male, age 74, both hemispheres 584.3
1963 Male, age 80, left hemisphere 576.6
1940 Female, age 85, left hemisphere 547.1
2113 Female, age 91, right hemisphere 538.3
2437 Female, age 94, left hemisphere 535.4
Hippocampus, CA3
nTPM: 555.4
2436 Male, age 74, both hemispheres 596.1
2137 Male, age 80, left hemisphere 587.8
1867 Male, age 76, both hemispheres 577.1
1891 Female, age 85, both hemispheres 550.6
2620 Female, age 94, left hemisphere 514.5
2861 Female, age 67, both hemispheres 506.0
Parahippocampal cortex
nTPM: 555.7
1850 Male, age 80, both hemispheres 597.7
1933 Female, age 85, both hemispheres 571.8
1990 Female, age 91, right hemisphere 568.1
2245 Female, age 91, both hemispheres 568.1
2250 Female, age 67, right hemisphere 559.0
2532 Female, age 72, left hemisphere 557.1
2018 Male, age 76, both hemispheres 553.6
2692 Male, age 74, both hemispheres 531.0
2622 Female, age 67, right hemisphere 525.4
2693 Female, age 94, both hemispheres 524.9
Perirhinal gyrus
nTPM: 575.1
1847 Female, age 91, left hemisphere 613.3
1841 Female, age 85, right hemisphere 584.0
1794 Male, age 80, right hemisphere 580.1
2848 Male, age 76, right hemisphere 552.9
2521 Female, age 94, right hemisphere 545.6
Subiculum
nTPM: 553.0
1901 Male, age 80, both hemispheres 578.5
1977 Female, age 85, both hemispheres 563.2
2438 Female, age 94, left hemisphere 558.7
2042 Male, age 76, both hemispheres 556.5
2619 Male, age 74, both hemispheres 540.0
2729 Female, age 91, right hemisphere 521.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 512.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 512.9
Samples: 197

Max nTPM: 1284.6
Min nTPM: 179.4
Std nTPM: 173.7
Median nTPM: 477.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1284.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1032.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1009.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 984.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 968.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 950.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 892.7
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 855.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 855.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 844.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 834.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1018.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1018.1
FF:10169-103B7 60 years, female 1496.2
FF:10153-102I9 76 years, female 540.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 76.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 76.4
Samples: 4

Max nTPM: 105.4
Min nTPM: 53.0
Sample A Female 105.4
Sample B Female 71.6
Sample C Male 75.7
Sample D Male 53.0
Entorhinal cortex
nTPM: 65.2
Samples: 4

Max nTPM: 77.5
Min nTPM: 54.1
Sample A Female 67.1
Sample B Female 77.5
Sample C Male 62.2
Sample D Male 54.1
Subiculum
nTPM: 62.3
Samples: 4

Max nTPM: 78.8
Min nTPM: 54.6
Sample A Female 78.8
Sample B Female 57.2
Sample C Male 54.6
Sample D Male 58.7
Ventral hippocampus
nTPM: 65.2
Samples: 4

Max nTPM: 75.5
Min nTPM: 45.7
Sample A Female 72.7
Sample B Female 45.7
Sample C Male 66.7
Sample D Male 75.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 511.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 502.8
Samples: 4

Max nTPM: 518.5
Min nTPM: 484.6
Sample A Male 497.0
Sample B Male 484.6
Sample C Female 511.0
Sample D Female 518.5
Hippocampal formation
nTPM: 511.8
Samples: 4

Max nTPM: 554.7
Min nTPM: 473.3
Sample A Male 554.7
Sample B Male 482.0
Sample C Female 473.3
Sample D Female 537.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.4
79587726 Antisense, RP_071204_02_D06, Mouse strain C57BL/6J (56 days, male) 10.3
79749602 Antisense, RP_071204_02_D06, Mouse strain C57BL/6J (56 days, male) 5.8
994 Antisense, RP_Baylor_103044, Mouse strain C57BL/6J (56 days, male) 2.2
993 Sense, RPS_Baylor_37046, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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