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RPS11
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TISSUE PRIMARY DATA AMYGDALA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:2353.0 nTPM
HPA:2353.0 nTPM
GTEx:2065.5 nTPM
FANTOM5:174.0 Scaled Tags Per Million
Pig:334.6 nTPM
Mouse:719.3 nTPM
Allen mouse:10.4 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 2353.0
Sample id Sample description nTPM
Amygdala
nTPM: 2353.0
2695 Female, age 67, right hemisphere 2465.0
2514 Male, age 75, right hemisphere 2364.9
2517 Female, age 94, left hemisphere 2316.1
2814 Male, age 76, right hemisphere 2312.0
1987 Female, age 91, left hemisphere 2307.1
Basal amygdala
nTPM: 2294.0
2827 Female, age 67, right hemisphere 2412.9
2609 Male, age 75, right hemisphere 2324.0
2685 Female, age 94, left hemisphere 2281.3
2110 Male, age 80, left hemisphere 2274.6
1955 Male, age 76, both hemispheres 2236.5
2243 Female, age 91, right hemisphere 2234.5
Central amygdala
nTPM: 2318.7
2826 Female, age 94, left hemisphere 2512.2
2515 Male, age 75, right hemisphere 2318.8
1905 Male, age 76, both hemispheres 2271.1
2239 Male, age 80, left hemisphere 2252.4
2701 Female, age 91, right hemisphere 2238.9
Corticomedial amygdala
nTPM: 2266.0
2428 Male, age 75, right hemisphere 2299.8
2535 Female, age 67, right hemisphere 2286.2
2429 Female, age 94, left hemisphere 2265.2
2829 Male, age 80, left hemisphere 2258.1
2240 Male, age 76, both hemispheres 2245.3
2242 Female, age 91, right hemisphere 2241.5
Lateral amygdala
nTPM: 2340.5
2830 Female, age 67, right hemisphere 2519.8
2516 Male, age 75, right hemisphere 2412.9
2534 Female, age 94, left hemisphere 2366.5
2256 Male, age 80, left hemisphere 2277.9
1883 Male, age 76, both hemispheres 2239.6
2255 Female, age 91, right hemisphere 2226.5
Stria terminalis, bed nucleus
nTPM: 2211.1
1974 Female, age 91, both hemispheres 2261.3
2201 Male, age 74, unknown 2202.2
2486 Female, age 94, both hemispheres 2169.7

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 2065.5
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 2065.5
Samples: 152

Max nTPM: 5426.4
Min nTPM: 987.0
Std nTPM: 795.8
Median nTPM: 1916.0
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 5426.4
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 5032.4
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 4950.9
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 4462.4
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 4001.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 3968.6
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 3921.1
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 3602.1
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 3478.8
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 3474.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 3409.3
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 3388.7
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 3361.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 3334.1
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 3078.4
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 3071.5
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 3066.7
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 3052.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 2922.6
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 2833.5
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 2802.6
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 2784.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 2760.2
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 2720.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 2680.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 2668.1
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 2630.3
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 2560.3
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 2534.2
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 2499.3
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 2499.2
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 2483.6
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 2475.2
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 2422.9
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 2418.2
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 2395.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 2395.2
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 2351.8
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 2350.9
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 2307.8
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 2290.5
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 2248.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 2237.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 2218.6
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 2215.2
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 2204.9
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 2204.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 2155.2
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 2107.2
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 2103.4
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 2095.0
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 2094.3
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 2073.8
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 2065.8
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 2062.0
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 2056.8
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 2043.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 2041.5
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 2037.7
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 2032.8
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 2023.3
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 2011.2
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 2006.0
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 1996.7
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 1984.7
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 1983.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 1980.0
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 1975.0
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 1973.6
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 1964.4
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 1958.9
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 1956.1
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 1949.4
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 1945.5
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 1936.7
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 1917.3
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 1914.8
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 1881.6
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 1878.5
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 1868.1
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 1867.8
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 1866.3
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 1849.2
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 1840.2
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 1829.6
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 1815.6
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 1815.0
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 1813.9
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 1773.8
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 1767.5
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 1764.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 1757.1
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 1746.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 1740.4
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 1738.6
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 1738.3
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 1722.5
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 1722.2
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 1706.5
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 1690.9
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 1684.9
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 1679.5
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 1675.6
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 1648.0
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 1593.4
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 1586.4
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 1584.1
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 1581.1
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 1579.3
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 1556.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 1556.0
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 1553.4
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 1550.3
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 1549.1
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 1535.9
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 1518.1
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 1498.0
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 1495.7
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 1486.4
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 1473.3
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 1464.6
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 1435.5
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 1430.9
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 1430.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 1429.5
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 1422.2
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 1401.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 1394.3
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 1393.3
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 1387.9
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 1367.9
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 1331.8
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 1302.5
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 1298.0
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 1287.7
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 1269.8
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 1267.4
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 1262.2
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 1260.1
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 1254.0
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 1252.7
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 1249.0
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 1225.6
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 1216.3
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 1184.5
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 1180.5
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 1168.0
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 1138.1
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 1023.2
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 1019.9
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 1002.2
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 987.0
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 174.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 174.0
FF:10151-102I7 76 years, female 174.0

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 334.6
Pig sample Sample description nTPM
Amygdala
nTPM: 334.6
Samples: 4

Max nTPM: 451.0
Min nTPM: 212.6
Sample A Female 451.0
Sample B Female 370.4
Sample C Male 304.3
Sample D Male 212.6

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 719.3
Mouse sample Sample description nTPM
Amygdala
nTPM: 719.4
Samples: 4

Max nTPM: 745.5
Min nTPM: 688.8
Sample A Male 688.8
Sample B Male 735.8
Sample C Female 745.5
Sample D Female 707.3

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 10.4
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 10.4
100143572 Antisense, RP_110407_01_F09, Mouse strain C57BL/6J (56 days, male) 10.4

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