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RPS11
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:2355.1 nTPM
HPA:1668.8 nTPM
GTEx:2355.1 nTPM
FANTOM5:271.1 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA049719
Glandular cells High


SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 1668.8
overview
Male, age 65
Small intestine sample 232
nTPM: 2022.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 1661.2
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 1527.6
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 1463.7

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 2355.1
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 2355.1
Samples: 187

Max nTPM: 5180.2
Min nTPM: 1129.7
Std nTPM: 759.7
Median nTPM: 2168.1
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 5180.2
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 4546.8
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 4531.0
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 4433.2
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 4300.6
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 4229.4
GTEX-183FY-1626-SM-793D8 20-29 years, male 4109.8
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 4097.1
GTEX-14PK6-1626-SM-6871I 70-79 years, female 3897.6
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 3892.0
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 3825.1
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 3795.8
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 3706.2
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 3626.9
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 3592.8
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 3570.9
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 3553.4
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 3460.1
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 3445.5
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 3392.5
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 3351.4
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 3327.3
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 3325.3
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 3316.0
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 3309.6
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 3303.9
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 3261.2
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 3229.1
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 3177.2
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 3171.4
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 3143.9
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 3125.1
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 3113.9
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 3059.4
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 3058.1
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 3023.3
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 2888.8
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 2864.3
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 2859.8
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 2856.3
GTEX-1C475-1426-SM-793CH 40-49 years, female 2790.2
GTEX-13O61-1326-SM-5KM31 60-69 years, male 2775.0
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 2774.1
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 2743.5
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 2728.2
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 2714.4
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 2709.1
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 2689.4
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 2678.1
GTEX-1192X-2526-SM-59868 50-59 years, male 2675.3
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 2673.1
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 2662.7
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 2655.8
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 2653.6
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 2653.0
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 2637.1
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 2595.6
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 2569.8
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 2537.3
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 2530.9
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 2527.9
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 2514.3
GTEX-117YX-0326-SM-5GICL 50-59 years, male 2513.6
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 2496.6
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 2480.9
GTEX-14PKU-1626-SM-6871C 40-49 years, female 2479.4
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 2469.4
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 2458.8
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 2443.2
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 2424.3
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 2419.0
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 2413.2
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 2412.0
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 2395.0
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 2391.5
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 2348.3
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 2339.1
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 2332.3
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 2327.4
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 2327.4
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 2305.8
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 2301.4
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 2300.8
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 2294.0
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 2277.7
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 2230.1
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 2227.3
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 2225.9
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 2222.4
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 2207.9
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 2188.4
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 2172.7
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 2169.6
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 2168.1
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 2167.8
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 2141.0
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 2121.5
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 2119.5
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 2113.0
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 2112.7
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 2101.9
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 2094.4
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 2085.6
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 2077.6
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 2072.9
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 2056.7
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 2054.5
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 2054.4
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 2053.5
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 2044.0
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 2032.7
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 2024.1
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 2019.1
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 2007.6
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 2007.0
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 2001.8
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1992.1
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1988.0
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1973.7
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1971.5
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1954.8
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1944.3
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1935.0
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1927.6
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1913.3
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1907.7
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 1902.6
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1893.8
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1892.0
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1884.6
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1876.7
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1874.2
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1871.0
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1863.8
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1861.7
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1857.3
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1854.0
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1837.5
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 1824.4
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1802.0
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1793.1
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1787.4
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 1785.7
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1777.7
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 1769.9
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 1762.4
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1762.0
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 1755.4
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1755.0
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1751.1
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1722.0
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1714.9
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1712.8
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 1707.2
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 1704.2
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 1701.9
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 1699.9
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 1695.6
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1694.9
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 1690.4
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 1687.4
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 1671.5
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 1663.4
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 1634.1
GTEX-144GM-1026-SM-79OKU 20-29 years, male 1611.0
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 1596.0
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 1593.2
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 1560.5
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 1547.2
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 1539.6
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1509.8
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 1486.2
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 1477.7
GTEX-111YS-1426-SM-5GID8 60-69 years, male 1473.8
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 1458.0
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 1441.2
GTEX-1122O-1326-SM-5H11F 60-69 years, female 1431.5
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 1423.9
GTEX-14PN3-2026-SM-68729 60-69 years, female 1375.6
GTEX-YFCO-1326-SM-664NV 40-49 years, male 1362.7
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 1355.0
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 1310.5
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 1293.9
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 1266.0
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 1255.8
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 1141.8
GTEX-ZTSS-0926-SM-59865 40-49 years, male 1129.7
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 271.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 271.1
FF:10024-101D6 15,40,85 years, mixed 271.1

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