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RPS11
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TISSUE PRIMARY DATA KIDNEY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Kidney
Tissue proteome
Kidney
KIDNEY - Expression summary
Protein expression
Kidneyi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Cells in glomeruli: Not detected
Cells in tubules: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:2155.4 nTPM
HPA:1566.4 nTPM
GTEx:2155.4 nTPM
FANTOM5:238.8 Scaled Tags Per Million

KIDNEY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA049719
Cells in glomeruli Not detected
Cells in tubules Medium


KIDNEY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 1566.4
overview
Female, age 58
Kidney sample 55
nTPM: 1336.8
Cell types%
Cells in tubules:
60

Cells in glomeruli:
20

Fibroblasts:
5

Other cell types:
15

overview
Female, age 67
Kidney sample 56
nTPM: 1298.5
Cell types%
Cells in tubules:
70

Cells in glomeruli:
15

Fibroblasts:
10

Other cell types:
5

overview
Female, age 55
Kidney sample 57
nTPM: 1197.8
Cell types%
Cells in tubules:
80

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
5

overview
Male, age 46
Kidney sample 58
nTPM: 1467
Cell types%
Cells in tubules:
60

Cells in glomeruli:
25

Fibroblasts:
5

Other cell types:
10

overview
Female, age 57
Kidney sample 358
nTPM: 1464.3
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Kidney sample 377
nTPM: 1574.3
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
20

overview
Male, age 73
Kidney sample 380
nTPM: 2983.5
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Female, age 59
Kidney sample 394
nTPM: 1335.9
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
15

overview
Female, age 48
Kidney sample 414
nTPM: 1439.3
Cell types%
Cells in tubules:
60

Cells in glomeruli:
5

Fibroblasts:
10

Other cell types:
25


KIDNEY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 2155.4
GTEx sample id Sample description nTPM
Kidney - Cortex
Average nTPM: 2031.7
Samples: 85

Max nTPM: 4618.3
Min nTPM: 1153.7
Std nTPM: 623.6
Median nTPM: 1887.4
GTEX-11TTK-1926-SM-5PNW8 60-69 years, female 4618.3
GTEX-NPJ8-2226-SM-3TW8D 40-49 years, male 3615.1
GTEX-ZYT6-2226-SM-5GIC9 30-39 years, male 3395.0
GTEX-13RTJ-2226-SM-5S2Q1 60-69 years, male 3120.4
GTEX-13NYB-1726-SM-5N9G2 40-49 years, male 3119.8
GTEX-17F97-1926-SM-7IGM4 50-59 years, male 3115.6
GTEX-1PWST-2226-SM-EVR3G 70-79 years, male 3054.5
GTEX-1JMPZ-1226-SM-ARU8Y 30-39 years, male 3040.9
GTEX-1JMQJ-1726-SM-E9U4V 50-59 years, male 2897.9
GTEX-T6MN-1826-SM-EXOHN 50-59 years, male 2859.7
GTEX-1N2DW-1826-SM-EAZ54 50-59 years, male 2858.7
GTEX-14E6D-2526-SM-5YYA9 50-59 years, male 2822.4
GTEX-1QP6S-1526-SM-EXUSG 40-49 years, male 2606.0
GTEX-ZDXO-0226-SM-4WKH7 60-69 years, male 2600.8
GTEX-1399S-0526-SM-5IJG8 30-39 years, female 2595.4
GTEX-1NV8Z-2226-SM-EXOJ2 60-69 years, male 2574.2
GTEX-13OVL-1826-SM-5KLZR 50-59 years, male 2494.3
GTEX-11OF3-1326-SM-5N9FJ 60-69 years, male 2488.2
GTEX-13112-2126-SM-5GCO4 50-59 years, male 2470.3
GTEX-15CHQ-2126-SM-6871M 60-69 years, male 2468.5
GTEX-1CB4J-1926-SM-7MGX8 60-69 years, male 2316.3
GTEX-14C5O-2026-SM-5YYB1 60-69 years, male 2308.9
GTEX-1GN1U-2126-SM-AHZ4J 50-59 years, female 2308.0
GTEX-T5JC-1526-SM-4DM68 20-29 years, male 2267.8
GTEX-17HHY-2326-SM-7KFSR 50-59 years, male 2262.2
GTEX-1C6VQ-2326-SM-7IGN1 50-59 years, male 2256.7
GTEX-1J1OQ-1426-SM-AHZ3P 40-49 years, female 2246.0
GTEX-1OJC4-2326-SM-DTXA5 50-59 years, female 2226.0
GTEX-1KWVE-0826-SM-CXZKO 30-39 years, male 2202.6
GTEX-1GTWX-1826-SM-9QEHG 60-69 years, male 2181.3
GTEX-1R9PO-1626-SM-E6CPT 60-69 years, female 2161.9
GTEX-1JMQK-1926-SM-CJI3B 60-69 years, male 2161.8
GTEX-O5YV-1226-SM-EV795 60-69 years, female 2093.4
GTEX-1HB9E-1826-SM-D4P33 50-59 years, male 2078.7
GTEX-17F96-1926-SM-7MGWY 70-79 years, male 2023.2
GTEX-QDT8-1726-SM-EYYV6 30-39 years, female 2022.3
GTEX-QDVN-1626-SM-48TZC 50-59 years, male 1978.7
GTEX-ZLFU-0926-SM-5P9F8 40-49 years, male 1959.0
GTEX-1F48J-2226-SM-7MXTN 50-59 years, female 1955.9
GTEX-1A3MW-2226-SM-73KUX 60-69 years, female 1933.3
GTEX-1GF9W-1326-SM-7P8PX 60-69 years, male 1916.2
GTEX-1E2YA-1626-SM-7MGXS 50-59 years, male 1897.4
GTEX-15DYW-2026-SM-6AJBD 60-69 years, female 1887.4
GTEX-1BAJH-1826-SM-731DA 70-79 years, male 1876.9
GTEX-ZE9C-1426-SM-4WKGM 60-69 years, male 1859.4
GTEX-13O1R-2526-SM-5N9FW 60-69 years, male 1836.7
GTEX-14C39-2126-SM-664OH 40-49 years, male 1798.9
GTEX-1GF9V-1926-SM-9JGHE 60-69 years, male 1781.4
GTEX-ZVZP-0926-SM-5GIDB 50-59 years, male 1779.5
GTEX-13OW6-1826-SM-5N9F9 50-59 years, male 1756.1
GTEX-1LG7Y-2726-SM-D5OVW 50-59 years, male 1753.8
GTEX-13OVI-1126-SM-5KLZF 60-69 years, female 1747.4
GTEX-1IL2V-1826-SM-ARU7R 70-79 years, male 1707.1
GTEX-1MUQO-2526-SM-E9TJN 60-69 years, male 1669.1
GTEX-RN64-1626-SM-48FD7 50-59 years, male 1661.5
GTEX-147F4-2626-SM-5Q5CS 50-59 years, male 1637.8
GTEX-1HBPI-2026-SM-CE6RZ 50-59 years, male 1631.3
GTEX-1I1GP-1926-SM-CNNQU 50-59 years, male 1617.7
GTEX-S33H-1426-SM-EZ6L7 30-39 years, male 1611.2
GTEX-16MT8-1926-SM-7EPGL 60-69 years, female 1607.1
GTEX-145MN-0326-SM-5QGQI 30-39 years, male 1595.0
GTEX-1A8FM-2026-SM-7P8RN 50-59 years, female 1586.1
GTEX-1IKK5-0926-SM-A9G2U 60-69 years, male 1578.6
GTEX-REY6-1826-SM-EAZAT 60-69 years, male 1577.0
GTEX-P4QS-1126-SM-3NMD5 60-69 years, male 1570.1
GTEX-12696-0926-SM-5FQTV 60-69 years, male 1551.9
GTEX-1H3NZ-2126-SM-9WPQ6 60-69 years, male 1541.1
GTEX-Y5V5-1226-SM-EYYVP 60-69 years, female 1522.9
GTEX-1EKGG-2226-SM-7IGOA 60-69 years, male 1513.7
GTEX-1HCU7-1826-SM-A9G2A 50-59 years, male 1490.4
GTEX-1GMR3-2426-SM-7MXV2 40-49 years, male 1464.9
GTEX-1N2EF-1426-SM-EXUSH 60-69 years, male 1452.0
GTEX-Y5V6-2026-SM-5IFHO 60-69 years, male 1436.4
GTEX-1JJ6O-2526-SM-AHZ3J 60-69 years, male 1418.6
GTEX-1AX8Z-2326-SM-731CR 60-69 years, male 1395.6
GTEX-1H3VY-1926-SM-9JGHJ 50-59 years, male 1387.4
GTEX-ZYFG-1626-SM-5GZYY 60-69 years, female 1386.7
GTEX-QLQW-1626-SM-CMKFE 30-39 years, male 1376.1
GTEX-11GS4-2326-SM-5A5KS 60-69 years, male 1356.4
GTEX-1K9T9-1826-SM-CXZK2 50-59 years, female 1341.1
GTEX-ZC5H-1726-SM-5HL7X 40-49 years, female 1340.2
GTEX-XPVG-0526-SM-4B65N 50-59 years, male 1298.4
GTEX-12WSG-0826-SM-5EQ5A 50-59 years, female 1286.3
GTEX-1JMLX-1526-SM-AHZ3N 50-59 years, male 1276.4
GTEX-1497J-0826-SM-5NQAJ 60-69 years, male 1153.7
Show allShow less
Kidney - Medulla
Average nTPM: 2155.4
Samples: 4

Max nTPM: 2453.9
Min nTPM: 1437.0
Std nTPM: 418.3
Median nTPM: 2365.3
GTEX-RU72-1926-SM-EAZ3F 50-59 years, female 2453.9
GTEX-T5JC-1626-SM-EZ6KW 20-29 years, male 2423.3
GTEX-R55E-2026-SM-EZ6L1 20-29 years, male 2307.4
GTEX-TKQ2-0626-SM-EZ6LB 50-59 years, male 1437.0

KIDNEY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 238.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Kidney
Scaled Tags Per Million: 238.8
FF:10017-101C8 60,62,63 years, female 238.8

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