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SH3BGRL3
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  • SH3BGRL3
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:126.5 nTPM
FANTOM5:253.1 Scaled Tags Per Million
Pig:257.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA030848
Glial cells Not detected
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 126.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 126.5
Samples: 246

Max nTPM: 299.3
Min nTPM: 51.5
Std nTPM: 31.6
Median nTPM: 123.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 299.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 216.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 216.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 215.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 207.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 203.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 201.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 198.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 195.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 191.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 187.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 184.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 183.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 180.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 174.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 174.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 172.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 172.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 172.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 170.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 168.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 165.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 165.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 165.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 164.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 163.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 163.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 162.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 162.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 161.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 159.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 157.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 156.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 155.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 155.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 154.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 154.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 153.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 153.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 153.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 153.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 152.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 152.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 152.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 151.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 151.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 150.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 149.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 148.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 148.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 147.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 146.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 146.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 146.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 146.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 146.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 144.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 143.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 143.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 143.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 142.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 142.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 141.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 141.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 141.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 141.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 141.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 140.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 139.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 139.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 138.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 138.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 138.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 138.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 137.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 137.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 137.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 137.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 136.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 136.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 134.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 134.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 134.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 134.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 134.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 134.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 133.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 133.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 132.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 132.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 131.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 131.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 131.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 131.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 130.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 130.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 130.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 129.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 129.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 129.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 129.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 128.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 128.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 128.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 128.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 127.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 127.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 127.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 126.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 126.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 126.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 126.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 125.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 125.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 125.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 125.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 125.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 124.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 124.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 124.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 124.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 123.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 123.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 123.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 123.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 123.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 123.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 122.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 122.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 122.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 122.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 121.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 121.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 121.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 121.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 120.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 120.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 119.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 119.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 119.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 119.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 119.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 119.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 118.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 118.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 118.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 118.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 117.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 116.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 116.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 115.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 115.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 115.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 115.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 115.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 115.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 115.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 115.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 114.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 114.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 114.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 114.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 114.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 113.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 113.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 112.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 112.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 112.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 112.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 111.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 111.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 110.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 110.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 110.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 110.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 110.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 109.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 109.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 108.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 107.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 107.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 107.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 107.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 106.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 106.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 106.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 106.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 105.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 105.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 105.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 105.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 104.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 104.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 104.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 103.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 103.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 102.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 102.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 101.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 101.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 100.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 98.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 98.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 98.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 98.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 98.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 97.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 97.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 96.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 96.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 96.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 96.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 96.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 95.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 94.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 93.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 93.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 93.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 92.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 91.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 91.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 91.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 91.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 91.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 88.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 88.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 88.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 87.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 86.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 85.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 85.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 81.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 80.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 76.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 76.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 76.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 74.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 73.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 73.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 73.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 71.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 64.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 63.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 63.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 62.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 51.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 253.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 253.1
FF:10164-103B2 76 years, female 253.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 257.4
Pig sample Sample description nTPM
Caudate
nTPM: 257.4
Samples: 4

Max nTPM: 342.9
Min nTPM: 198.9
Sample A Female 198.9
Sample B Female 219.7
Sample C Male 342.9
Sample D Male 268.1

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