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RPL11
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BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:758.6 nTPM
HPA:758.6 nTPM
GTEx:995.9 nTPM
FANTOM5:57.4 Scaled Tags Per Million
Pig:0.7 nTPM
Mouse:665.2 nTPM
Allen mouse:15.4 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 758.6
Sample id Sample description nTPM
Amygdala
nTPM: 758.6
2695 Female, age 67, right hemisphere 800.9
2514 Male, age 75, right hemisphere 772.8
2517 Female, age 94, left hemisphere 745.6
2814 Male, age 76, right hemisphere 738.2
1987 Female, age 91, left hemisphere 735.7
Basal amygdala
nTPM: 742.3
2827 Female, age 67, right hemisphere 785.4
2609 Male, age 75, right hemisphere 758.5
2110 Male, age 80, left hemisphere 731.0
2685 Female, age 94, left hemisphere 730.7
1955 Male, age 76, both hemispheres 728.7
2243 Female, age 91, right hemisphere 719.8
Central amygdala
nTPM: 748.9
2826 Female, age 94, left hemisphere 818.0
2515 Male, age 75, right hemisphere 746.6
1905 Male, age 76, both hemispheres 730.8
2239 Male, age 80, left hemisphere 725.2
2701 Female, age 91, right hemisphere 724.0
Corticomedial amygdala
nTPM: 732.0
2240 Male, age 76, both hemispheres 756.7
2428 Male, age 75, right hemisphere 745.3
2535 Female, age 67, right hemisphere 741.7
2242 Female, age 91, right hemisphere 718.0
2829 Male, age 80, left hemisphere 717.5
2429 Female, age 94, left hemisphere 712.4
Lateral amygdala
nTPM: 752.6
2830 Female, age 67, right hemisphere 794.5
2516 Male, age 75, right hemisphere 781.2
2534 Female, age 94, left hemisphere 777.6
2256 Male, age 80, left hemisphere 730.6
1883 Male, age 76, both hemispheres 720.4
2255 Female, age 91, right hemisphere 711.5
Stria terminalis, bed nucleus
nTPM: 716.7
1974 Female, age 91, both hemispheres 733.0
2201 Male, age 74, unknown 714.1
2486 Female, age 94, both hemispheres 703.2

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 995.9
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 995.9
Samples: 152

Max nTPM: 2682.7
Min nTPM: 487.6
Std nTPM: 400.0
Median nTPM: 884.7
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 2682.7
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 2516.6
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 2244.5
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 2226.6
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 2205.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 1966.2
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 1960.6
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 1844.5
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 1829.9
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 1767.0
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 1765.9
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 1698.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 1530.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 1505.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 1491.4
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 1480.3
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 1440.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 1437.2
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 1413.0
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 1405.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 1403.1
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 1367.5
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 1343.3
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 1326.3
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 1314.0
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 1274.1
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 1254.7
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 1246.6
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 1237.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 1227.6
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 1226.6
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 1212.8
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 1194.2
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 1185.3
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 1184.7
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 1181.0
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 1162.4
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 1141.1
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 1140.7
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 1127.3
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 1112.4
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 1095.7
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 1094.1
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 1085.8
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 1068.9
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 1055.9
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 1046.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 1043.2
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 1040.5
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 1034.2
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 1025.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 1011.2
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 1010.1
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 1008.0
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 993.1
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 982.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 977.2
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 976.5
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 966.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 954.2
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 948.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 944.0
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 930.5
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 923.0
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 922.4
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 921.1
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 920.8
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 915.5
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 914.0
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 911.2
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 906.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 902.9
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 901.1
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 893.8
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 892.1
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 886.5
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 882.9
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 877.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 872.3
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 868.9
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 859.1
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 855.7
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 854.7
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 854.5
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 853.1
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 850.8
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 845.7
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 839.4
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 838.7
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 838.3
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 831.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 828.5
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 827.0
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 824.9
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 824.9
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 824.0
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 822.5
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 818.2
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 799.0
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 795.7
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 791.4
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 779.0
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 772.8
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 771.8
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 764.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 764.5
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 761.5
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 760.3
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 753.3
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 751.0
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 747.1
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 740.3
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 728.2
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 727.2
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 721.3
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 714.7
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 712.6
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 710.6
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 702.8
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 701.5
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 701.4
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 699.9
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 699.7
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 695.0
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 690.2
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 688.1
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 684.0
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 678.8
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 677.8
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 668.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 667.2
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 657.8
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 652.3
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 640.9
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 635.8
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 634.6
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 627.3
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 617.7
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 616.4
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 611.8
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 603.0
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 603.0
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 596.4
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 588.6
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 584.6
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 577.3
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 553.4
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 550.8
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 521.1
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 516.4
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 502.9
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 487.6
Show allShow less

AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 57.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 57.4
FF:10151-102I7 76 years, female 57.4

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 0.7
Pig sample Sample description nTPM
Amygdala
nTPM: 0.7
Samples: 4

Max nTPM: 1.3
Min nTPM: 0.1
Sample A Female 0.1
Sample B Female 1.3
Sample C Male 1.1
Sample D Male 0.4

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 665.2
Mouse sample Sample description nTPM
Amygdala
nTPM: 665.2
Samples: 4

Max nTPM: 689.1
Min nTPM: 631.1
Sample A Male 631.1
Sample B Male 678.0
Sample C Female 689.1
Sample D Female 662.6

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 15.4
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 15.4
199144 Antisense, RP_040609_01_B11, Mouse strain C57BL/6J (56 days, male) 15.4
276067 Antisense, RP_040609_01_B11, Mouse strain C57BL/6J (56 days, male) 13.3

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