HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:736.6 nTPM
HPA:736.6 nTPM
GTEx:900.3 nTPM
FANTOM5:157.4 Scaled Tags Per Million
Pig:0.6 nTPM
Mouse:654.1 nTPM
Allen mouse:17.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002734
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 736.6
Sample id Sample description nTPM
Hippocampus
nTPM: 736.6
2529 Female, age 94, left hemisphere 752.9
2621 Female, age 67, right hemisphere 747.5
1911 Female, age 85, right hemisphere 736.1
1898 Male, age 80, left hemisphere 734.4
1855 Male, age 76, left hemisphere 728.6
2148 Female, age 91, left hemisphere 720.4
Dentate gyrus
nTPM: 734.2
2530 Female, age 94, left hemisphere 770.0
2010 Male, age 76, both hemispheres 746.3
2246 Female, age 85, both hemispheres 742.1
2531 Female, age 67, both hemispheres 735.8
1927 Female, age 91, both hemispheres 708.6
2528 Male, age 74, both hemispheres 702.2
Entorhinal gyrus
nTPM: 728.6
2686 Male, age 75, right hemisphere 760.1
2117 Female, age 91, right hemisphere 739.6
1787 Male, age 76, left hemisphere 737.8
1938 Female, age 85, left hemisphere 715.7
2764 Male, age 80, right hemisphere 712.1
2613 Female, age 94, left hemisphere 706.3
Hippocampus, CA1
nTPM: 724.4
2045 Male, age 76, both hemispheres 747.7
1873 Female, age 85, both hemispheres 724.9
2527 Male, age 74, both hemispheres 724.8
2749 Male, age 80, left hemisphere 714.0
2082 Female, age 91, right hemisphere 710.5
Hippocampus, CA2
nTPM: 723.9
1892 Male, age 76, both hemispheres 739.9
2437 Female, age 94, left hemisphere 731.3
1940 Female, age 85, left hemisphere 730.4
1963 Male, age 80, left hemisphere 719.5
2113 Female, age 91, right hemisphere 714.8
2249 Male, age 74, both hemispheres 707.8
Hippocampus, CA3
nTPM: 717.8
1891 Female, age 85, both hemispheres 736.7
1867 Male, age 76, both hemispheres 731.2
2861 Female, age 67, both hemispheres 725.8
2620 Female, age 94, left hemisphere 707.2
2137 Male, age 80, left hemisphere 703.4
2436 Male, age 74, both hemispheres 702.6
Parahippocampal cortex
nTPM: 722.4
2018 Male, age 76, both hemispheres 754.2
2245 Female, age 91, both hemispheres 730.7
2532 Female, age 72, left hemisphere 728.4
2692 Male, age 74, both hemispheres 726.8
1850 Male, age 80, both hemispheres 726.3
2622 Female, age 67, right hemisphere 722.3
1990 Female, age 91, right hemisphere 715.8
1933 Female, age 85, both hemispheres 709.7
2250 Female, age 67, right hemisphere 708.4
2693 Female, age 94, both hemispheres 701.5
Perirhinal gyrus
nTPM: 716.9
1794 Male, age 80, right hemisphere 725.4
2848 Male, age 76, right hemisphere 721.0
1841 Female, age 85, right hemisphere 716.3
1847 Female, age 91, left hemisphere 712.8
2521 Female, age 94, right hemisphere 709.0
Subiculum
nTPM: 733.3
2042 Male, age 76, both hemispheres 755.0
1901 Male, age 80, both hemispheres 741.2
1977 Female, age 85, both hemispheres 735.3
2438 Female, age 94, left hemisphere 732.4
2619 Male, age 74, both hemispheres 725.4
2729 Female, age 91, right hemisphere 710.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 900.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 900.3
Samples: 197

Max nTPM: 2362.9
Min nTPM: 392.4
Std nTPM: 318.4
Median nTPM: 820.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2362.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 2030.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1939.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1845.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1818.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1763.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1758.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1683.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1590.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 1576.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1571.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 157.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 157.4
FF:10169-103B7 60 years, female 257.4
FF:10153-102I9 76 years, female 57.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 0.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 0.4
Samples: 4

Max nTPM: 0.5
Min nTPM: 0.2
Sample A Female 0.5
Sample B Female 0.3
Sample C Male 0.2
Sample D Male 0.5
Entorhinal cortex
nTPM: 0.6
Samples: 4

Max nTPM: 0.7
Min nTPM: 0.5
Sample A Female 0.6
Sample B Female 0.7
Sample C Male 0.5
Sample D Male 0.5
Subiculum
nTPM: 0.6
Samples: 4

Max nTPM: 0.9
Min nTPM: 0.3
Sample A Female 0.4
Sample B Female 0.8
Sample C Male 0.9
Sample D Male 0.3
Ventral hippocampus
nTPM: 0.6
Samples: 4

Max nTPM: 0.8
Min nTPM: 0.4
Sample A Female 0.6
Sample B Female 0.8
Sample C Male 0.4
Sample D Male 0.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 654.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 636.0
Samples: 4

Max nTPM: 677.2
Min nTPM: 598.1
Sample A Male 638.7
Sample B Male 629.9
Sample C Female 677.2
Sample D Female 598.1
Hippocampal formation
nTPM: 654.1
Samples: 4

Max nTPM: 734.4
Min nTPM: 602.1
Sample A Male 734.4
Sample B Male 602.1
Sample C Female 633.0
Sample D Female 646.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.6
199144 Antisense, RP_040609_01_B11, Mouse strain C57BL/6J (56 days, male) 17.6
276067 Antisense, RP_040609_01_B11, Mouse strain C57BL/6J (56 days, male) 13.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.