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RPL11
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BRAIN RETINA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Eye
Retina
RETINA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:386.7 nTPM
GTEx:386.7 nTPM
FANTOM5:135.7 Scaled Tags Per Million
Pig:1.7 nTPM
Mouse:934.9 nTPM

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 386.7
GTEx sample id Sample description nTPM
Retina
Average nTPM: 386.7
Samples: 105

Max nTPM: 603.0
Min nTPM: 150.7
Std nTPM: 83.7
Median nTPM:
379_1 60 years, male 603.0
384_1 83 years, male 584.7
452_1 88 years, female 536.0
4_1 88 years, female 535.6
218_1 71 years, female 534.4
189_1 76 years, male 529.7
389_1 86 years, female 516.7
35_1 74 years, female 512.9
237_1 82 years, male 499.3
120_1 70 years, female 478.0
447_1 81 years, male 477.7
2_1 77 years, female 476.9
145_1 84 years, male 471.4
265_1 87 years, male 468.3
153_1 70 years, female 468.0
321_1 62 years, female 464.1
264_1 73 years, female 463.3
394_1 75 years, female 463.0
376_1 75 years, female 460.9
17_1 71 years, male 455.7
246_1 77 years, male 451.2
173_1 67 years, male 448.7
375_1 74 years, female 445.8
286_1 68 years, female 443.6
243_1 75 years, male 442.6
396_1 62 years, male 441.6
386_1 76 years, male 441.1
354_1 81 years, female 438.6
295_1 61 years, female 437.0
137_1 83 years, male 433.6
377_1 82 years, female 432.7
322_1 76 years, male 432.4
126_1 63 years, male 427.4
355_1 70 years, female 426.3
254_1 77 years, female 425.0
348_1 84 years, male 424.7
526_1 61 years, male 420.2
319_1 81 years, male 419.6
6_1 73 years, female 417.5
163_1 78 years, male 416.4
315_1 62 years, female 416.0
177_1 74 years, male 415.4
404_1 82 years, female 413.4
172_1 72 years, female 407.9
229_1 69 years, female 406.5
425_1 59 years, female 401.1
349_1 83 years, male 398.8
307_1 66 years, female 398.2
347_1 72 years, male 396.7
314_1 67 years, male 394.8
351_1 91 years, male 394.4
503_1 68 years, male 394.1
316_1 62 years, male 393.8
405_1 91 years, male 391.5
320_1 89 years, female 389.7
311_1 78 years, male 383.7
350_1 84 years, female 380.7
41_1 94 years, female 378.1
317_1 60 years, male 377.8
115_1 83 years, male 376.1
406_1 79 years, male 373.8
18_1 88 years, male 368.2
217_1 76 years, male 368.1
288_1 66 years, female 367.4
42_1 85 years, male 365.4
109_1 81 years, female 364.5
308_1 70 years, female 362.3
495_1 57 years, female 361.9
353_1 82 years, female 361.7
139_1 64 years, female 359.9
99_1 64 years, male 359.6
117_1 61 years, male 357.3
251_1 78 years, male 352.0
335_1 73 years, female 349.9
468_1 89 years, male 348.8
119_1 70 years, female 348.7
352_1 62 years, male 345.4
499_1 55 years, female 336.2
291_1 76 years, male 335.5
480_1 63 years, male 334.9
506_1 65 years, male 332.5
518_1 75 years, female 329.0
517_1 88 years, male 326.3
356_1 87 years, female 324.9
142_1 61 years, female 319.4
318_1 68 years, male 318.5
266_1 85 years, male 313.2
293_1 68 years, female 312.7
162_1 79 years, female 311.5
32_1 67 years, male 305.4
313_1 79 years, female 304.8
324_1 76 years, male 304.6
9_1 66 years, female 301.2
414_1 84 years, female 285.6
81_1 67 years, male 281.5
292_1 71 years, male 268.7
501_1 88 years, male 266.6
415_1 77 years, female 258.6
89_1 63 years, male 254.6
43_1 64 years, female 248.9
466_1 57 years, female 248.5
149_1 88 years, male 193.3
491_1 89 years, female 190.4
413_1 59 years, female 156.7
490_1 67 years, female 150.7
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 135.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 135.7
FF:10030-101E3 24-65 years, mixed 135.7

RETINA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1.7
Pig sample Sample description nTPM
Retina
nTPM: 1.7
Samples: 4

Max nTPM: 2.4
Min nTPM: 1.3
Sample A Female 1.5
Sample B Female 2.4
Sample C Male 1.6
Sample D Male 1.3

RETINA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 934.9
Mouse sample Sample description nTPM
Retina
nTPM: 934.9
Samples: 4

Max nTPM: 1018.6
Min nTPM: 751.4
Sample A Male 954.3
Sample B Male 751.4
Sample C Female 1015.2
Sample D Female 1018.6

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.