PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:558.7 nTPM
HPA:558.7 nTPM
FANTOM5:2217.2 Scaled Tags Per Million
Pig:544.9 nTPM
Mouse:1329.8 nTPM
Allen mouse:19.6 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 558.7
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 296.2
2301 Female, age 85, both hemispheres 339.5
2188 Female, age 91, both hemispheres 331.1
1984 Male, age 76, both hemispheres 280.8
2090 Male, age 80, both hemispheres 233.4
Area postrema
nTPM: 127.5
2054 Male, age 76, both hemispheres 161.0
2306 Male, age 80, both hemispheres 137.3
2799 Male, age 61, both hemispheres 84.1
Cuneate nuclei
nTPM: 286.0
2376 Male, age 61, both hemispheres 331.6
2131 Male, age 76, both hemispheres 318.6
2381 Male, age 80, both hemispheres 207.8
Dorsal cochlear nucleus
nTPM: 237.1
2187 Female, age 91, both hemispheres 284.7
2802 Male, age 74, right hemisphere 249.3
2058 Male, age 76, both hemispheres 235.0
2378 Male, age 80, both hemispheres 217.1
2370 Male, age 61, both hemispheres 199.5
Dorsal medullary reticular nucleus
nTPM: 284.5
2040 Female, age 85, both hemispheres 404.7
2373 Male, age 61, both hemispheres 242.8
2088 Male, age 76, both hemispheres 205.9
Dorsal motor vagal complex
nTPM: 180.7
2133 Female, age 91, both hemispheres 312.5
2000 Male, age 74, unknown 257.5
2844 Male, age 55, unknown 165.7
2813 Female, age 72, unknown 160.1
2185 Male, age 76, both hemispheres 151.5
2643 Male, age 74, both hemispheres 145.1
2807 Female, age 85, both hemispheres 132.3
2797 Male, age 61, both hemispheres 121.0
Dorsal tegmental nucleus
nTPM: 224.2
2326 Male, age 74, both hemispheres 276.8
2083 Male, age 80, both hemispheres 252.3
1936 Male, age 76, left hemisphere 208.4
2358 Male, age 61, both hemispheres 159.1
Dorsolateral tegmental area
nTPM: 224.9
2751 Female, age 85, both hemispheres 328.6
2654 Male, age 80, both hemispheres 256.9
2360 Male, age 74, both hemispheres 225.1
2141 Male, age 76, both hemispheres 210.2
2337 Male, age 61, both hemispheres 103.4
Gigantocellular reticular nuclei, medullary
nTPM: 334.2
2462 Male, age 74, both hemispheres 513.5
2310 Male, age 80, both hemispheres 342.7
1876 Female, age 85, both hemispheres 325.8
2387 Female, age 91, both hemispheres 311.2
2022 Male, age 76, right hemisphere 257.6
2314 Male, age 61, both hemispheres 254.1
Gigantocellular reticular nuclei, pars
nTPM: 326.1
2168 Male, age 76, both hemispheres 492.3
2084 Female, age 85, both hemispheres 301.7
2330 Male, age 80, both hemispheres 288.0
2336 Male, age 61, both hemispheres 282.5
2706 Male, age 80, both hemispheres 266.2
Inferior olive
nTPM: 194.6
2563 Male, age 74, both hemispheres 261.8
2628 Female, age 91, both hemispheres 200.9
2085 Female, age 85, both hemispheres 193.3
2178 Male, age 61, both hemispheres 185.8
2379 Male, age 80, both hemispheres 131.5
Kolliker-Fuse nucleus
nTPM: 264.7
2793 Female, age 91, left hemisphere 321.0
2163 Male, age 80, both hemispheres 287.7
2315 Male, age 76, right hemisphere 185.6
Lateral lemniscal nuclei
nTPM: 461.9
2453 Male, age 74, right hemisphere 513.4
2169 Male, age 76, both hemispheres 512.5
2036 Male, age 80, both hemispheres 506.5
2746 Female, age 85, left hemisphere 422.8
2320 Female, age 91, left hemisphere 354.3
Lateral medullary reticular nucleus
nTPM: 289.0
2305 Male, age 74, both hemispheres 447.7
2044 Male, age 76, both hemispheres 440.9
2804 Female, age 91, both hemispheres 231.6
2190 Female, age 85, both hemispheres 225.4
2374 Male, age 61, both hemispheres 200.7
2852 Male, age 80, both hemispheres 187.6
Lateral parabrachial nucleus
nTPM: 295.7
2139 Female, age 85, right hemisphere 426.1
2013 Male, age 80, both hemispheres 318.4
2790 Male, age 61, both hemispheres 248.1
2792 Male, age 76, both hemispheres 190.1
Lateral vestibular nucleus
nTPM: 250.5
2184 Male, age 76, both hemispheres 271.1
2311 Male, age 80, both hemispheres 229.9
Locus coeruleus
nTPM: 399.9
2720 Male, age 74, both hemispheres 522.2
2014 Male, age 55, unknown 481.9
2123 Female, age 91, both hemispheres 465.1
2317 Female, age 72, unknown 393.8
2788 Male, age 74, unknown 366.1
2162 Male, age 80, both hemispheres 291.8
1980 Male, age 76, both hemispheres 278.1
Medial olivary nucleus
nTPM: 201.0
1962 Male, age 76, both hemispheres 205.7
1943 Male, age 61, both hemispheres 204.2
2851 Male, age 80, both hemispheres 203.6
2138 Female, age 91, both hemispheres 190.6
Medial parabrachial nucleus
nTPM: 274.6
2854 Male, age 80, both hemispheres 349.3
2170 Female, age 91, both hemispheres 309.8
2463 Female, age 85, right hemisphere 261.9
2156 Male, age 61, both hemispheres 230.7
2786 Male, age 76, both hemispheres 221.5
Medial periolivary nuclei
nTPM: 456.4
2171 Female, age 85, both hemispheres 666.1
2063 Male, age 76, both hemispheres 550.3
2791 Male, age 74, right hemisphere 457.6
2458 Female, age 91, both hemispheres 304.5
2081 Male, age 80, both hemispheres 303.7
Medial vestibular nucleus
nTPM: 365.0
2801 Male, age 74, both hemispheres 421.2
2743 Female, age 85, both hemispheres 413.2
2093 Male, age 80, both hemispheres 374.7
2803 Female, age 91, both hemispheres 368.7
2624 Male, age 61, both hemispheres 309.4
2134 Male, age 76, both hemispheres 303.0
Motor facial nucleus
nTPM: 433.2
2062 Male, age 76, both hemispheres 582.1
2365 Male, age 74, right hemisphere 522.2
2327 Male, age 80, both hemispheres 459.6
2697 Female, age 85, both hemispheres 406.0
2126 Male, age 61, both hemispheres 366.8
2795 Female, age 91, both hemispheres 262.1
Motor hypoglossal nucleus
nTPM: 278.2
2125 Female, age 91, both hemispheres 408.7
2132 Female, age 85, both hemispheres 349.2
2461 Male, age 61, both hemispheres 268.4
2182 Male, age 80, both hemispheres 229.4
2277 Male, age 76, both hemispheres 135.1
Motor trigeminal nucleus
nTPM: 313.3
2079 Male, age 80, both hemispheres 414.0
2560 Male, age 74, both hemispheres 408.4
2321 Female, age 91, both hemispheres 287.5
2335 Male, age 61, both hemispheres 231.1
2309 Male, age 76, both hemispheres 225.7
Nuclei of the trapezoid body
nTPM: 540.2
2159 Male, age 61, both hemispheres 812.4
2735 Female, age 85, both hemispheres 654.1
1983 Male, age 76, both hemispheres 525.9
2166 Male, age 80, both hemispheres 383.0
2368 Female, age 91, both hemispheres 325.6
Nucleus ambiguus
nTPM: 197.3
2096 Female, age 85, both hemispheres 219.5
2071 Male, age 76, both hemispheres 175.1
Nucleus cuneatus
nTPM: 198.8
2100 Male, age 76, both hemispheres 272.7
2564 Male, age 74, both hemispheres 268.6
2562 Male, age 61, both hemispheres 184.5
2380 Male, age 80, both hemispheres 181.8
2808 Female, age 85, both hemispheres 162.8
2805 Female, age 91, both hemispheres 122.4
Nucleus gracilis
nTPM: 187.9
2627 Male, age 74, both hemispheres 267.3
2382 Male, age 80, both hemispheres 176.1
2299 Female, age 85, both hemispheres 120.3
Nucleus raphe magnus
nTPM: 558.7
2160 Male, age 61, both hemispheres 864.3
2172 Female, age 85, both hemispheres 674.6
2455 Male, age 74, both hemispheres 608.2
2328 Male, age 80, both hemispheres 438.4
2051 Male, age 76, both hemispheres 396.3
2459 Female, age 91, both hemispheres 370.5
Nucleus raphe obscurus
nTPM: 234.1
2800 Male, age 61, midline 297.7
2845 Female, age 85, midline 274.5
2142 Male, age 76, midline 130.2
Nucleus raphe pallidus
nTPM: 257.6
1924 Male, age 61, midline 310.5
2183 Male, age 80, midline 309.5
2145 Male, age 76, midline 152.8
Nucleus tractus solitarii
nTPM: 205.6
2144 Female, age 91, right hemisphere 368.0
2191 Female, age 85, both hemispheres 157.9
2656 Male, age 76, both hemispheres 157.5
2307 Male, age 80, both hemispheres 139.2
Paramedian reticular nucleus
nTPM: 393.4
2050 Female, age 85, both hemispheres 558.7
2313 Male, age 61, both hemispheres 390.9
2057 Male, age 80, both hemispheres 347.4
2052 Male, age 76, both hemispheres 276.7
Parvicellular reticular nuclei
nTPM: 342.5
2558 Male, age 74, both hemispheres 400.4
2095 Male, age 76, both hemispheres 338.0
2119 Male, age 80, both hemispheres 289.0
Parvicellular reticular nuclei, medullary
nTPM: 290.2
2189 Female, age 91, both hemispheres 335.3
2091 Female, age 85, both hemispheres 302.9
2181 Male, age 80, left hemisphere 232.6
Peritrigeminal nucleus
nTPM: 397.6
2179 Male, age 61, both hemispheres 506.9
2136 Male, age 76, both hemispheres 377.7
2067 Female, age 85, both hemispheres 308.3
Pontine nuclei
nTPM: 529.6
2727 Male, age 61, right hemisphere 840.9
2454 Male, age 74, left hemisphere 615.9
1863 Male, age 55, unknown 575.4
2787 Female, age 85, both hemispheres 552.5
2109 Female, age 72, unknown 552.2
1968 Male, age 76, left hemisphere 454.5
2319 Female, age 91, both hemispheres 350.8
2115 Male, age 80, left hemisphere 294.7
Pontine raphe nucleus
nTPM: 357.2
2122 Female, age 85, midline 488.7
2853 Male, age 76, midline 225.7
Posteroventral cochlear nucleus
nTPM: 278.9
2752 Female, age 85, both hemispheres 399.3
2070 Male, age 76, both hemispheres 293.3
2135 Female, age 91, both hemispheres 249.5
2341 Male, age 80, both hemispheres 247.3
2371 Male, age 61, both hemispheres 205.0
Prepositus hypoglossal nucleus
nTPM: 331.2
2855 Female, age 85, right hemisphere 408.5
2086 Male, age 80, both hemispheres 253.9
Principal sensory trigeminal nucleus
nTPM: 450.6
2158 Male, age 61, both hemispheres 691.1
2008 Male, age 80, left hemisphere 512.4
2367 Female, age 91, left hemisphere 357.6
2324 Male, age 76, both hemispheres 241.4
Reticular pontine nucleus, caudal
nTPM: 392.9
2332 Male, age 80, right hemisphere 464.5
2092 Male, age 76, both hemispheres 386.9
2457 Female, age 91, both hemispheres 363.4
2559 Male, age 74, both hemispheres 356.7
Reticular pontine nucleus, oral
nTPM: 392.6
2361 Male, age 74, both hemispheres 628.1
2012 Female, age 85, both hemispheres 452.0
2366 Female, age 91, both hemispheres 327.7
1939 Male, age 80, both hemispheres 298.3
2167 Male, age 76, both hemispheres 256.7
Reticulotegmental nucleus
nTPM: 324.0
2325 Male, age 76, both hemispheres 352.9
2452 Male, age 74, both hemispheres 334.3
2333 Male, age 80, both hemispheres 306.8
2322 Female, age 91, both hemispheres 301.9
Spinal trigeminal nucleus, caudal
nTPM: 291.3
2390 Female, age 91, both hemispheres 382.0
2447 Male, age 76, both hemispheres 336.0
2312 Male, age 61, both hemispheres 296.8
2642 Male, age 74, both hemispheres 229.3
2308 Male, age 80, both hemispheres 212.6
Spinal trigeminal nucleus, interpolar
nTPM: 394.0
2066 Male, age 76, right hemisphere 602.9
2389 Female, age 91, both hemispheres 389.8
2625 Male, age 61, both hemispheres 347.7
2386 Female, age 85, both hemispheres 318.9
2033 Male, age 80, both hemispheres 310.6
Spinal trigeminal nucleus, oral
nTPM: 276.0
2737 Female, age 85, both hemispheres 326.5
2164 Male, age 80, both hemispheres 296.2
1978 Male, age 76, both hemispheres 205.4
Spinal vestibular nucleus
nTPM: 294.4
2186 Female, age 91, both hemispheres 351.5
2806 Female, age 85, both hemispheres 322.6
2780 Male, age 80, both hemispheres 291.8
2748 Male, age 76, both hemispheres 270.4
2796 Male, age 61, both hemispheres 267.0
2384 Male, age 74, both hemispheres 263.1
Subcoeruleus area
nTPM: 305.8
1958 Male, age 80, both hemispheres 366.0
2089 Male, age 76, left hemisphere 358.8
2323 Female, age 91, left hemisphere 297.9
2369 Female, age 85, left hemisphere 289.0
2451 Male, age 74, both hemispheres 217.2
Superior olive
nTPM: 443.8
1875 Female, age 85, both hemispheres 584.1
2364 Male, age 74, right hemisphere 528.2
2329 Male, age 80, right hemisphere 400.2
2020 Male, age 76, both hemispheres 393.2
2561 Female, age 91, both hemispheres 313.0
Superior vestibular nucleus
nTPM: 242.0
2015 Male, age 80, both hemispheres 274.4
2383 Male, age 74, both hemispheres 247.7
2061 Male, age 76, both hemispheres 204.0
Ventral medullary reticular nucleus
nTPM: 241.2
2372 Male, age 61, both hemispheres 253.1
2060 Male, age 76, both hemispheres 229.2
Ventral periolivary nuclei
nTPM: 453.2
2130 Female, age 85, both hemispheres 578.6
2165 Male, age 80, both hemispheres 521.4
2023 Male, age 76, both hemispheres 382.7
2794 Female, age 91, left hemisphere 330.1
Ventrolateral medulla, A1-C1 cell groups
nTPM: 332.1
2741 Female, age 85, both hemispheres 426.8
1986 Male, age 76, both hemispheres 408.3
2180 Male, age 61, both hemispheres 316.3
2302 Female, age 91, both hemispheres 282.6
2118 Male, age 80, both hemispheres 226.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 369.8
2449 Male, age 74, both hemispheres 570.2
2840 Female, age 85, both hemispheres 391.5
1959 Male, age 76, both hemispheres 390.6
2161 Male, age 80, both hemispheres 358.4
2456 Female, age 91, both hemispheres 278.8
2359 Male, age 61, both hemispheres 229.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 2217.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 1150.7
FF:10182-103D2 60 years, female 1448.8
FF:10165-103B3 76 years, female 852.5
Medulla oblongata
Scaled Tags Per Million: 854.2
FF:10038-101F2 18-64 years, mixed 969.8
FF:10174-103C3 60 years, female 924.5
FF:10155-103A2 76 years, female 668.2
Pons
Scaled Tags Per Million: 2217.2
FF:10033-101E6 18-54 years, mixed 2217.2

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 544.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 379.5
Samples: 4

Max nTPM: 513.2
Min nTPM: 208.5
Sample A Female 513.2
Sample B Female 425.2
Sample C Male 371.1
Sample D Male 208.5
Pons
nTPM: 544.9
Samples: 4

Max nTPM: 661.3
Min nTPM: 390.0
Sample A Female 644.5
Sample B Female 390.0
Sample C Male 483.6
Sample D Male 661.3

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 1329.8
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 1329.8
Samples: 4

Max nTPM: 1402.4
Min nTPM: 1275.0
Sample A Male 1275.0
Sample B Male 1402.4
Sample C Female 1315.6
Sample D Female 1326.0

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 19.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 18.8
68546368 Antisense, RP_050120_02_D04, Mouse strain C57BL/6J (56 days, male) 20.2
70919203 Antisense, RP_050712_04_D08, Mouse strain C57BL/6J (56 days, male) 17.3
Pons
Expression energy: 19.6
68546368 Antisense, RP_050120_02_D04, Mouse strain C57BL/6J (56 days, male) 21.2
70919203 Antisense, RP_050712_04_D08, Mouse strain C57BL/6J (56 days, male) 18.0

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