HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:1229.0 nTPM
HPA:1229.0 nTPM
GTEx:1342.5 nTPM
FANTOM5:1285.4 Scaled Tags Per Million
Pig:2.7 nTPM
Mouse:3245.6 nTPM
Allen mouse:19.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044999Antibody CAB007790
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1229.0
Sample id Sample description nTPM
Hippocampus
nTPM: 1177.4
1898 Male, age 80, left hemisphere 1303.4
1911 Female, age 85, right hemisphere 1195.0
1855 Male, age 76, left hemisphere 1160.4
2621 Female, age 67, right hemisphere 1152.9
2529 Female, age 94, left hemisphere 1144.1
2148 Female, age 91, left hemisphere 1108.5
Dentate gyrus
nTPM: 1156.3
1927 Female, age 91, both hemispheres 1229.7
2530 Female, age 94, left hemisphere 1198.3
2010 Male, age 76, both hemispheres 1186.8
2246 Female, age 85, both hemispheres 1144.9
2528 Male, age 74, both hemispheres 1114.3
2531 Female, age 67, both hemispheres 1064.0
Entorhinal gyrus
nTPM: 1157.3
1938 Female, age 85, left hemisphere 1273.6
2764 Male, age 80, right hemisphere 1174.9
1787 Male, age 76, left hemisphere 1166.5
2117 Female, age 91, right hemisphere 1124.0
2613 Female, age 94, left hemisphere 1120.1
2686 Male, age 75, right hemisphere 1084.4
Hippocampus, CA1
nTPM: 1229.0
2749 Male, age 80, left hemisphere 1518.5
1873 Female, age 85, both hemispheres 1231.2
2527 Male, age 74, both hemispheres 1165.4
2045 Male, age 76, both hemispheres 1128.4
2082 Female, age 91, right hemisphere 1101.6
Hippocampus, CA2
nTPM: 1198.9
1892 Male, age 76, both hemispheres 1290.7
1963 Male, age 80, left hemisphere 1285.9
2249 Male, age 74, both hemispheres 1217.6
1940 Female, age 85, left hemisphere 1182.7
2113 Female, age 91, right hemisphere 1113.6
2437 Female, age 94, left hemisphere 1102.8
Hippocampus, CA3
nTPM: 1182.1
2137 Male, age 80, left hemisphere 1413.1
1867 Male, age 76, both hemispheres 1234.2
1891 Female, age 85, both hemispheres 1199.5
2436 Male, age 74, both hemispheres 1132.0
2620 Female, age 94, left hemisphere 1074.9
2861 Female, age 67, both hemispheres 1039.0
Parahippocampal cortex
nTPM: 1165.5
1850 Male, age 80, both hemispheres 1312.5
1933 Female, age 85, both hemispheres 1221.7
1990 Female, age 91, right hemisphere 1201.4
2245 Female, age 91, both hemispheres 1174.1
2250 Female, age 67, right hemisphere 1149.7
2532 Female, age 72, left hemisphere 1144.8
2693 Female, age 94, both hemispheres 1137.5
2018 Male, age 76, both hemispheres 1135.5
2692 Male, age 74, both hemispheres 1116.5
2622 Female, age 67, right hemisphere 1061.7
Perirhinal gyrus
nTPM: 1228.7
1841 Female, age 85, right hemisphere 1291.4
1847 Female, age 91, left hemisphere 1278.8
1794 Male, age 80, right hemisphere 1227.5
2521 Female, age 94, right hemisphere 1182.8
2848 Male, age 76, right hemisphere 1162.9
Subiculum
nTPM: 1157.5
1901 Male, age 80, both hemispheres 1286.6
2042 Male, age 76, both hemispheres 1183.1
1977 Female, age 85, both hemispheres 1182.1
2438 Female, age 94, left hemisphere 1120.5
2619 Male, age 74, both hemispheres 1109.5
2729 Female, age 91, right hemisphere 1063.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1342.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1342.5
Samples: 197

Max nTPM: 2830.8
Min nTPM: 449.2
Std nTPM: 393.3
Median nTPM: 1244.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2830.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 2362.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 2265.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 2246.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 2227.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 2206.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 2188.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 2163.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 2162.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 2130.1
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 2108.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1285.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1285.4
FF:10169-103B7 60 years, female 1568.4
FF:10153-102I9 76 years, female 1002.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 2.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 2.6
Samples: 4

Max nTPM: 3.9
Min nTPM: 1.0
Sample A Female 1.0
Sample B Female 2.4
Sample C Male 3.0
Sample D Male 3.9
Entorhinal cortex
nTPM: 2.7
Samples: 4

Max nTPM: 3.0
Min nTPM: 2.1
Sample A Female 2.1
Sample B Female 2.7
Sample C Male 3.0
Sample D Male 3.0
Subiculum
nTPM: 2.3
Samples: 4

Max nTPM: 2.9
Min nTPM: 1.4
Sample A Female 1.4
Sample B Female 2.9
Sample C Male 2.9
Sample D Male 2.0
Ventral hippocampus
nTPM: 2.5
Samples: 4

Max nTPM: 3.7
Min nTPM: 1.9
Sample A Female 2.2
Sample B Female 3.7
Sample C Male 1.9
Sample D Male 2.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3245.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2929.4
Samples: 4

Max nTPM: 3143.1
Min nTPM: 2801.8
Sample A Male 2801.8
Sample B Male 3143.1
Sample C Female 2968.5
Sample D Female 2804.1
Hippocampal formation
nTPM: 3245.6
Samples: 4

Max nTPM: 3693.9
Min nTPM: 2794.3
Sample A Male 3693.9
Sample B Male 3229.5
Sample C Female 3264.7
Sample D Female 2794.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.9
183 Antisense, RP_Baylor_102653, Mouse strain C57BL/6J (56 days, male) 19.9
182 Antisense, RP_Baylor_102653, Mouse strain C57BL/6J (56 days, male) 19.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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